Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 435 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  217 bits (552), Expect = 7e-61
 Identities = 130/427 (30%), Positives = 219/427 (51%), Gaps = 13/427 (3%)

Query: 10  LIGVLVGLVLMGMHIAIAL-FGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPL 68
           L+G+L   VL+ +H+ + +  G+A V  + +    D A  M+     + ++    ATIPL
Sbjct: 9   LLGLLATFVLIALHVPVGVAMGIAGVVGFGLFAGFDPALAMIASETSNNLSSLELATIPL 68

Query: 69  FVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRV 128
           FVLMG    V+ +  D +++A  L+     GL +AT+     F AV G S+A+AA F + 
Sbjct: 69  FVLMGSFAGVAGLSEDLYRLAYALVGHRRGGLAMATIGGCAGFGAVCGSSVATAATFGKA 128

Query: 129 AVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLML 188
           ++P M   GY P F+AGTVA    LG+LIPPS +++IY +LA+  I  +++A ++P L+ 
Sbjct: 129 SLPSMLSRGYSPGFAAGTVASGGTLGILIPPSSIMVIYAVLAQELIITLYIAALVPALI- 187

Query: 189 AGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLGG 248
               V+ L  +TL    +    P       R T      A  M     P+V L  +V+GG
Sbjct: 188 --AVVLHLCAITL----YTRWHPQDAPIGPRATAAERWQAARM---SWPVVALAAIVIGG 238

Query: 249 LYTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLLVAASFYSR 308
           +  G FT TE+  +GA  A   A+ RR+L    L Q +  T   S  I +L++ AS +  
Sbjct: 239 MAVGVFTATESAAVGAALAFAFAVGRRALTWESLRQALLSTATTSGMIYVLIIGASLFGY 298

Query: 309 MLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPIAQGM 368
             A+   P A+   V  SG      +     + ++ G + D  + ++I +P   P+ +  
Sbjct: 299 FAAVTQAPQALVEGVQASGIPVWAAVVALMAMFIVAGAVFDEVAAMVISMPFVLPLIKSW 358

Query: 369 GIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVMLLVL 428
           G D + +G++ V+ +E+G+L PP G++VF V      P + + +I+   +P++    L L
Sbjct: 359 GFDPVWWGVINVVIIELGMLIPPLGMNVFVVKGVA--PQIPIGAIYRGVMPYVISNFLRL 416

Query: 429 VIVALVP 435
            ++ + P
Sbjct: 417 AVLLMFP 423