Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 464 a.a., TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  205 bits (522), Expect = 2e-57
 Identities = 122/442 (27%), Positives = 226/442 (51%), Gaps = 16/442 (3%)

Query: 6   FGFV---LIGVLVGLVLMGMHIAIALFGVAF----VGIWLIRDNIDLAF-RMLELTAYSG 57
           FGF+   +  V+V  +L+G  +A +L  +      +G+W+     D++F   L L  ++ 
Sbjct: 4   FGFMPPLMFAVMVVFLLIGFPVAFSLAAIGLMFGAIGVWM--GQFDVSFLHALPLRFHAI 61

Query: 58  IADYLFATIPLFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGV 117
           +A+ L  +IP F +MG ++    +  D  +   +L   +  G+  A V    +  A+TG 
Sbjct: 62  VANDLLWSIPFFTMMGAVLERCRLAEDLLEGVGKLFGAVPGGVAFAVVLVGAVLGAITGT 121

Query: 118 SIASAAVFTRVAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGM 177
             AS      +++P M R+GY    + G +A S  +  LIPPSL+LI+       S+G M
Sbjct: 122 VAASVVAMGVISLPVMMRYGYNMRLATGVIAASGTITQLIPPSLVLIVLADQLGRSVGDM 181

Query: 178 FLAGILPGLMLAGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTP 237
           +L  I P ++  G F++ +  + +  P  +   P  V++  +          +++  + P
Sbjct: 182 YLGAIGPSILQVGVFLLFIAVVAIFRPHHMPPLPAEVRSGPK-----WKLVGQVLMGMLP 236

Query: 238 IVLLVILVLGGLYTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSIL 297
              L+ LVLG +  G+ TPTE+G +GA GA+++A   R L    LW   K T  I+  ++
Sbjct: 237 AAGLMFLVLGTILAGWATPTESGAMGAVGAMLLAALNRRLTLDTLWSACKSTMRITTMVI 296

Query: 298 LLLVAASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIM 357
            +L+ ++ ++ +       + +  L+T    G  GFL F A  I ++   LD   I  I+
Sbjct: 297 FILMGSTIFTLVFHGMDGGHWVEHLLTSLPGGQTGFLLFVAAFIFVLAFFLDFFEIAFIL 356

Query: 358 VPIAAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAAT 417
           +P+ AP A+ +GID++ FG++  + ++   + PPFG++++ +   +  P V    I+   
Sbjct: 357 IPLLAPAAKALGIDMVWFGVLVCVVMQTSFMHPPFGVALYYIRG-IAPPSVKSSDIYLGA 415

Query: 418 LPFIAVMLLVLVIVALVPTTAT 439
           +P+I + L+V+V+V L P + T
Sbjct: 416 IPWILLQLVVVVVVVLWPQSVT 437



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 177 MFLAGILPGLMLAGGFVVMLIGLTLAF 203
           MF  G +P LM A   V +LIG  +AF
Sbjct: 1   MFEFGFMPPLMFAVMVVFLLIGFPVAF 27