Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 433 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  280 bits (717), Expect = 5e-80
 Identities = 159/430 (36%), Positives = 246/430 (57%), Gaps = 11/430 (2%)

Query: 10  LIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPLF 69
           LI +LV LV++G+ I  A    A +G++     ID    +L+ +A SGI +Y F  IP F
Sbjct: 9   LIALLV-LVVVGVPIVFAFAAAASLGLYFALGGIDPVINLLQQSALSGIKEYNFVVIPCF 67

Query: 70  VLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRVA 129
            +MG+L++      D F V    LR +   L VATV  N +FAAVTGV +A+AA F+ VA
Sbjct: 68  TVMGMLIAHCGAASDLFNVVNRGLRGVPGRLAVATVGGNAVFAAVTGVGVAAAAAFSHVA 127

Query: 130 VPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLMLA 189
            P M    Y  +F+ G +AGSSVLG+LIPPS+ +I++ IL E S+G +F AG+ PGL+LA
Sbjct: 128 YPAMREARYSRSFATGCIAGSSVLGLLIPPSVFMIVWAILTEQSVGKLFAAGVFPGLLLA 187

Query: 190 GGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLGGL 249
             + V  +      P      P+     +    LT    R  I     + LL+ + LGG+
Sbjct: 188 FLYAVYCMVYAKVKPSVA---PELTNEER--VSLT----RTQIGGSIGVGLLIAVTLGGI 238

Query: 250 YTGFFTPTEAGGIGAFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLLVAASFYSRM 309
           + GFFTPTE   IG  G+ I+A + + +    ++    + G     I+LLL+ A+ YS++
Sbjct: 239 WFGFFTPTEGSAIGLVGSAILAWA-KGMRWRGVFNAFVEAGRTVTPIMLLLLTATIYSKL 297

Query: 310 LAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPIAQGMG 369
           +A+ G+P  +  L+   G G  G L F   +  ++G ++DS SI+L+ VPI  P+A  +G
Sbjct: 298 IALNGIPQEVQALLESMGLGTGGTLLFMVAVWFILGAMIDSISIMLLTVPIFWPVAMALG 357

Query: 370 IDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVMLLVLV 429
           ID + F ++ +L +E G+LTPPFGI VF V   + D +++V  IF  ++P+  ++L +  
Sbjct: 358 IDPIVFALIGILVIEAGVLTPPFGIGVFVVKAAIPDRNITVSEIFKGSVPYWVLILFLAW 417

Query: 430 IVALVPTTAT 439
           ++ + P  AT
Sbjct: 418 LIYVWPALAT 427