Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 426 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  200 bits (509), Expect = 6e-56
 Identities = 123/429 (28%), Positives = 223/429 (51%), Gaps = 20/429 (4%)

Query: 8   FVLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIP 67
           F+LI    GL ++G+ +AIAL   +   +WL      +   +L  T +S +  +L   +P
Sbjct: 4   FLLIAFF-GLSMLGVPLAIALALASVGTLWLFTS---MPMDLLSQTMFSSMNSFLLVAVP 59

Query: 68  LFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTR 127
           LF+L+G ++    V    F  AE ++  +  GLG   V ++ IF+ V+G S+A  A    
Sbjct: 60  LFILVGTVMERGRVAERIFDFAEAMVGWLPGGLGHVNVISSVIFSGVSGSSVADIASVGA 119

Query: 128 VAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLM 187
           + +  M RHG+   ++ G    +S L  +IPPS+L++I G +A VSIG + +AG++PGL 
Sbjct: 120 IEIKAMERHGFPKGYAVGMTLCTSTLSSIIPPSILIVIAGSIANVSIGTLLIAGLVPGLF 179

Query: 188 LAGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLG 247
           +A  F+V     ++    +    P     R     +     R ++  LTP++L++     
Sbjct: 180 IALAFLVFNHFYSV---HYGYNPPTPFNFRL----VVVTGLRAILPMLTPLILII----- 227

Query: 248 GLYTGFFTPTEAGGIG-AFGALIVALSRRSLDRHKLWQVMKQTGVISVSILLLLVAASFY 306
           G+ +G FTPTEA  I   + A++  +  R+L   +L +++  T  IS +IL +   +   
Sbjct: 228 GIASGLFTPTEAAAIAVVYVAVLGVIVYRTLPVRELPEILISTARISGTILFIAATSQLA 287

Query: 307 SRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPIAQ 366
           + +    GLP  +  L+     GP+  +    V +L++G+ +++   + I++P+  P  +
Sbjct: 288 AWVFTFDGLPEQVAELLKAMNLGPMTGMLVIFVFLLIIGIFMEAIPAMFILIPVLMPPVE 347

Query: 367 GMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVMLL 426
            +GID +HF IVTV+ + +GL+TPP G+ +F      N   + +E +   +L  + V+ L
Sbjct: 348 ALGIDPIHFLIVTVMTLTLGLVTPPVGVCLFAAAQVAN---MKIEDVIRGSLAPMTVLTL 404

Query: 427 VLVIVALVP 435
            +  + L P
Sbjct: 405 AIFALVLFP 413