Pairwise Alignments

Query, 673 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 729 a.a., fatty acid oxidation complex subunit alpha FadB from Pectobacterium carotovorum WPP14

 Score =  238 bits (608), Expect = 6e-67
 Identities = 190/636 (29%), Positives = 294/636 (46%), Gaps = 42/636 (6%)

Query: 37  LDAVTRVQGARLAILRCAGRTFIAGGDMREF----DAPPQPPD-----LPDVVDAIEASA 87
           LD +      +  +LR     FI G D+ EF     AP +           +   +E   
Sbjct: 43  LDVLAEQPNLKGLLLRSDKPAFIVGADITEFLSLFAAPAEKLHEWLVFANRIFSRLEDLP 102

Query: 88  TPFVAVMQGTVLGGGLEIAMGCAYRIAAPGTRFGLPEVTVGLIPGAGGTQRAPRLFGWDA 147
            P ++ +    LGGG E  +   +R+A    R GLPE  +G++PG GGT R PRL G D+
Sbjct: 103 VPTLSAINSYALGGGCECVLATDFRLATADARIGLPETKLGIMPGFGGTVRLPRLLGADS 162

Query: 148 AIDMACAGKLLSAQEAHARGALDAI-ADDPEAAARALVPEPRIPVS------ERPAPPPP 200
           A+++  AGK +SA +A   G + A+ A+D    A   + +  I  S       RP   P 
Sbjct: 163 ALEIIAAGKDISAADALKVGLVQAVVANDKLVPAAIKMLKQAINGSLDWQAYRRPKLDPL 222

Query: 201 DSARIAAHRRTLAARA-------RGQTAPLQALDALLWATGPFREGQRKERALH-LSLRA 252
              +I A      A+A       +   AP+ A+  +  A    R+   +    H + L  
Sbjct: 223 KLNKIEAMMSFTTAKAMVLQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLAR 282

Query: 253 SDQSRALRHAFFAERTV---ARPAVIRDRTPREIARIAVMGGGLMGAGIAAACLGAGYRV 309
           S+++RAL   F  ++ V   A+  +     P++ A   V+G G+MG GIA      G  +
Sbjct: 283 SNEARALVGIFLNDQYVKGKAKKLIGETSVPQQAA---VLGAGIMGGGIAYQSAFKGVPI 339

Query: 310 DLLERDAATAEAARDRVRGLIAGALRRGKIDQARHDAHCAALRTGVGIGHAAEADLAIEA 369
            + + +        +    L+   + RGK+D  +     A+++  +        D+ +EA
Sbjct: 340 RMKDINEKPLALGMNEAAKLLNKQMERGKLDGMKMATILASIQPTLDYAGFERTDIVVEA 399

Query: 370 VFEETATKRAAFAALAQVMAPDAILATNTSYLDPREIFAGIPAPDRCLGLHFFAPAHVMK 429
           V E    K +  A     ++   ILA+NTS +    + A +  P    G+HFF P H M 
Sbjct: 400 VVENPKIKASVLAETESHVSEKTILASNTSTIPIASLAASLKRPQNFCGMHFFNPVHRMP 459

Query: 430 LLEVVRLPETSAETLATAFALAGRLRKVAVLSGICDGFIGNRMLAAYRRAAEYMLADGAL 489
           L+E++R P+TS  T+A+  A A ++ K  ++   C GF  NR+L  Y  A   +L DGA 
Sbjct: 460 LVEIIRGPKTSDNTIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGAD 519

Query: 490 PEQIDGAM-RAYGMAMGPFEAQDLSGL---HIAEANRRRQDATRPARERYVTLSDQLCAL 545
             +ID  M + +G  MGP    D+ G+   H A+A        R A++ Y    D L   
Sbjct: 520 FREIDNVMEKKFGWPMGPAYLLDVVGIDTAHHAQAVMAEGFPQRMAKD-YRDAIDVLFEH 578

Query: 546 GRTGQRAGKGWYAY---AEGDRRPRVDPAVTALITDYSAAHGLPRRTHDAGEIQARLLAV 602
            R GQ+ G G+Y Y   ++G  R   D AV  L+ D       P++   A EI AR++  
Sbjct: 579 QRFGQKNGHGFYRYQTDSKGKLRKEQDEAVETLLKDSRQ----PKKAFSAEEIIARMMIP 634

Query: 603 LANEGARLVEEGIADSDAAVDMVKLHGYGFPRWRGG 638
           + NE AR +EEGI  S A  DM  ++G GFP + GG
Sbjct: 635 MINEVARCLEEGIVASPAEADMALVYGLGFPPFHGG 670