Pairwise Alignments

Query, 425 a.a., protein of unknown function DUF21 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 526 a.a., Putative capsular polysaccharide transport protein YegH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  144 bits (363), Expect = 6e-39
 Identities = 92/329 (27%), Positives = 172/329 (52%), Gaps = 17/329 (5%)

Query: 106 VVIAITYLSLIVGELVPKQIALRAPE---QVAARMAPMMHAVARVA--------APLIWL 154
           V++ +++L +I   LV +      P+     A   + M+ A+ ++A        +    L
Sbjct: 186 VILCLSFLLMIGFSLVAEGFGFHIPKGYLYAAIGFSVMIEALNQLAIFNRRRFLSANHTL 245

Query: 155 LDRSGKVILTLLGQSGKQSATVSDDEVRLIIAEAESAGVMNPAESQMIAGVMRIADRTAR 214
             R+ + ++ L+  SGK+     D E   ++A+ + + + NP E +MI  V+ +  RT  
Sbjct: 246 RQRTTEAVMRLI--SGKKEDAELDAETAAMLADHDDSQIFNPQERRMIERVLNLNQRTVS 303

Query: 215 GLMTPRLEVETLEICDSKSQILQDLKDVSRSRLPVW-EGDIDNIIGVLTTRDLLGPVLND 273
            +MT R ++E +++   +++I   L+    +RL V  E + ++++GV+   DLL   L  
Sbjct: 304 SIMTSRHDIEHIDLNAPEAEIRALLEKNQHTRLVVTGENEQEDLLGVVHVIDLLQQSLRG 363

Query: 274 GPLSLRALLRGAPIVQEGQSALLVIDRLRNAPAHMVLVYDEFGHFVGIVTPMNILEAIAG 333
            PL+LRAL+R   +  E    L  +++ RNA  H   V DEFG   GIVT  +++E IAG
Sbjct: 364 EPLNLRALIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVMETIAG 423

Query: 334 EFPDEGED---EPKMVKRADGSYLVAGWMPVDEFAEHFSIEIDPDRDFETVAGLVLEQTG 390
             P+E E+      + K  DGS+   G MP+++  ++  + +D  R++ T+AGL++E   
Sbjct: 424 NLPNEVEEIDARHDIQKNPDGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQ 483

Query: 391 HLPALGEQVAFESMTIEVVDLDGRRIDKL 419
            +P  GE+V      ++ + ++  R+ K+
Sbjct: 484 RIPQTGEEVQVGDYLLKTLQVESHRVQKV 512