Pairwise Alignments

Query, 191 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 119 a.a., ribosome-associated translation inhibitor RaiA from Paraburkholderia sabiae LMG 24235

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 32/113 (28%), Positives = 61/113 (53%), Gaps = 9/113 (7%)

Query: 1   MRYQITGKQIDIGEALQRHVKAELSEVVGKYAERPTDANVVFSKDAYNHV-----CEATV 55
           M  +I+G  +D+  AL+ +V  +L  V+ ++ ++  D +VV S D +         E  +
Sbjct: 1   MNLKISGHHLDVTPALREYVITKLDRVL-RHFDQVIDGSVVLSVDNHKEKEKRQKVEINL 59

Query: 56  HLSTGLTAQAKASAHEIYAAFDKCSEKMEKQLRRYKRRLKNHHRD--RTEPVA 106
           HL  G     ++   ++YAA D   +K+++Q+ R+K RL+ H  D  + +P+A
Sbjct: 60  HLK-GKDIFVESCDGDLYAAIDLMIDKLDRQVIRHKDRLQGHQHDAIKYQPLA 111