Pairwise Alignments

Query, 191 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 112 a.a., ribosome-associated translation inhibitor RaiA from Pectobacterium carotovorum WPP14

 Score = 47.4 bits (111), Expect = 9e-11
 Identities = 29/94 (30%), Positives = 54/94 (57%), Gaps = 4/94 (4%)

Query: 1  MRYQITGKQIDIGEALQRHVKAELSEVVGKYAERPTDANVVFSKDAYNHVCEATVHLSTG 60
          M   IT KQ+DI  A+++HV+  LS+ + K+  +  + +++ SK+    V + T+    G
Sbjct: 1  MTINITSKQMDITPAIRQHVEDRLSK-LDKWQTQLINPHIILSKEPQGFVADGTISTPNG 59

Query: 61 -LTAQAKASAHEIYAAFDKCSEKMEKQLRRYKRR 93
           L A AK    ++YAA ++   K+E+QL + + +
Sbjct: 60 PLVASAKHD--DMYAAINELITKLERQLDKLQHK 91