Pairwise Alignments

Query, 191 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 113 a.a., ribosome-associated translation inhibitor RaiA from Serratia liquefaciens MT49

 Score = 45.1 bits (105), Expect = 5e-10
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 1  MRYQITGKQIDIGEALQRHVKAELSEVVGKYAERPTDANVVFSKDAYNHVCEATVHLSTG 60
          M   IT KQ+DI  A++ HV+  L++ + K+  +  + ++V SK+    V +AT+    G
Sbjct: 1  MTLNITSKQMDITPAIRSHVEDRLTK-LEKWQAQLINPHIVLSKEPKGFVADATITTPNG 59

Query: 61 LTAQAKASAHEIYAAFDKCSEKMEKQLRRYKRR 93
              A A   ++Y A ++   K+E+QL + + +
Sbjct: 60 -PLVASAKHEDMYTAVNELIAKLERQLNKVQHK 91