Pairwise Alignments

Query, 191 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 95 a.a., ribosomal subunit interface protein from Kangiella aquimarina DSM 16071

 Score = 47.0 bits (110), Expect = 1e-10
 Identities = 23/97 (23%), Positives = 56/97 (57%), Gaps = 2/97 (2%)

Query: 1  MRYQITGKQIDIGEALQRHVKAELSEVVGKYAERPTDANVVFSKDAYNHVCEATVHLSTG 60
          M+  +TG+ +DI +AL+  V  + ++ + ++ +   +  V  + +    + EAT+H++ G
Sbjct: 1  MQINLTGRHLDITDALRDFVNEKFAK-LERHFDHINNVYVTLTVEKVRQIAEATLHVNGG 59

Query: 61 LTAQAKASAHEIYAAFDKCSEKMEKQLRRYKRRLKNH 97
              A + + ++YAA D   +K+++Q+ ++K ++  H
Sbjct: 60 -EIFANSESEDMYAAIDLLIDKLDRQVIKHKEKMTRH 95