Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 367 a.a., DNA polymerase III subunit beta from Pseudomonas putida KT2440

 Score =  254 bits (648), Expect = 3e-72
 Identities = 145/375 (38%), Positives = 214/375 (57%), Gaps = 11/375 (2%)

Query: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQ 60
           M  +I+R  LL+ +     VVERR T+P+L+NVL+  +G  +S   TDL++E+V RV  +
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  VE-RAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPV 119
                G  TVPA  L +I + LP+ AL+ +  D  K  L V AGRS F+L+TLP  DFP 
Sbjct: 61  EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQK--LLVKAGRSRFTLSTLPANDFPT 118

Query: 120 MTTT--EYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVAT 177
           +       TCN       LRRL +++ FA++ ++ RYYLNG+ + V+      +LR V+T
Sbjct: 119 VEEGPGSLTCNLEQSK--LRRLIERTSFAMAQQDVRYYLNGMLLEVSRN----TLRAVST 172

Query: 178 DGHRLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEIT 237
           DGHRLA      P   E    VIVPRK + EL +LL D E  +++ + +  IR  T E T
Sbjct: 173 DGHRLALCSMSAPIEQEDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFT 232

Query: 238 LTSKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLI 297
            TSK++DG FPDY RV+P    + +  D     +A  R A +S+E+ R ++L L   +L 
Sbjct: 233 FTSKLVDGKFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLK 292

Query: 298 LSVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMRE 357
           +  N P+   AEEE++V Y    LEIGFN  YLL++   +  E    + + +    +++E
Sbjct: 293 IQANNPEQEEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQE 352

Query: 358 GSDSSAIYVVMPMRV 372
             +  + YVVMPMR+
Sbjct: 353 AGNDDSSYVVMPMRL 367