Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 366 a.a., DNA polymerase III subunit beta from Pectobacterium carotovorum WPP14

 Score =  239 bits (609), Expect = 1e-67
 Identities = 139/375 (37%), Positives = 211/375 (56%), Gaps = 12/375 (3%)

Query: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVT-A 59
           MK  +ER  LL+ + Q  S +  R T+PIL N+LI+    ++S   TDL++E+V +V   
Sbjct: 1   MKFIVERERLLKPLQQVSSPLGGRPTLPILGNLLIQVTEGALSLTGTDLEMEMVAKVALT 60

Query: 60  QVERAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPV 119
           Q    GATTVPA  L +I R LP+GA + +  D    R+ V +GRS FSL+TLP  DFP 
Sbjct: 61  QPHEPGATTVPARKLFDICRGLPEGAEITIMLDG--DRMLVRSGRSRFSLSTLPAADFPN 118

Query: 120 MTTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDG 179
           +   +    F+ P   ++RL + ++F+++ ++ RYYLNG+         G  LR VATDG
Sbjct: 119 LDDWQSEVEFSLPQATMKRLIEATQFSMAHQDVRYYLNGMLFET----EGEELRTVATDG 174

Query: 180 HRLARIDADLPDAAEGMPG--VIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEIT 237
           HRLA     +    + +P   VIVPRK V EL +LL+  +  + + +    IR    +  
Sbjct: 175 HRLAVCSMPV---GQSLPSHSVIVPRKGVMELVRLLDGGDTPLQLQIGSNNIRAHVGDFI 231

Query: 238 LTSKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLI 297
            TSK++DG FPDY RV+P +  + LE       +A  R A +S+E+ R V+L L +++L 
Sbjct: 232 FTSKLVDGRFPDYRRVLPKNPDKTLEASCDLLKQAFSRAAILSNEKFRGVRLHLIQNQLK 291

Query: 298 LSVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMRE 357
           ++ N P+   AEE L V Y    +EIGFN  Y+L++ + +  E    L   +     + +
Sbjct: 292 ITANNPEQEEAEEILDVQYDGTEMEIGFNVSYVLDVLNALKCEGVRLLLTDSVSSVQIED 351

Query: 358 GSDSSAIYVVMPMRV 372
            +  +A YVVMPMR+
Sbjct: 352 SASRAAAYVVMPMRL 366