Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 366 a.a., DNA polymerase III beta subunit (EC 2.7.7.7) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  246 bits (629), Expect = 5e-70
 Identities = 141/373 (37%), Positives = 214/373 (57%), Gaps = 8/373 (2%)

Query: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVT-A 59
           MK ++ER  LL+ + Q    +  R T+PIL N+L++    ++S   TDL++E+V RVT +
Sbjct: 1   MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLEMEMVARVTLS 60

Query: 60  QVERAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPV 119
           Q    GATTVPA    +I R LP+GA +A+  +    R+ V +GRS FSL+TLP  DFP 
Sbjct: 61  QPHEPGATTVPARKFFDICRGLPEGAEIAVQLEG--DRMLVRSGRSRFSLSTLPAADFPN 118

Query: 120 MTTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDG 179
           +   +    F  P   ++RL + ++F+++ ++ RYYLNG+         G  LR VATDG
Sbjct: 119 LDDWQSEVEFTLPQATMKRLIESTQFSMAHQDVRYYLNGMLFET----EGSELRTVATDG 174

Query: 180 HRLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEITLT 239
           HRLA     L +A+     VIVPRK V EL ++L+  E  + V +    IR    +   T
Sbjct: 175 HRLAVCSMPL-EASLPSHSVIVPRKGVIELMRMLDGGENPLRVQIGSNNIRAHVGDFIFT 233

Query: 240 SKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLILS 299
           SK++DG FPDY RV+P +  + LE       +A  R A +S+E+ R V+L + E++L ++
Sbjct: 234 SKLVDGRFPDYRRVLPKNPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKIT 293

Query: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMREGS 359
            N P+   AEE L V+YG   +EIGFN  Y+L++ + +  E    +   +     + + +
Sbjct: 294 ANNPEQEEAEEILDVSYGGTEMEIGFNVSYVLDVLNALKCETVRIMLTDSVSSVQIEDAA 353

Query: 360 DSSAIYVVMPMRV 372
             SA YVVMPMR+
Sbjct: 354 SQSAAYVVMPMRL 366