Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 367 a.a., DNA polymerase III, beta subunit from Kangiella aquimarina DSM 16071

 Score =  216 bits (550), Expect = 8e-61
 Identities = 126/373 (33%), Positives = 205/373 (54%), Gaps = 7/373 (1%)

Query: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQ 60
           M+ +I R  LL  +      VE+R T+P+L+NVL+  +   +S  ATDL++E+  +V  +
Sbjct: 1   MRFTISRDQLLAPLQLVSGAVEKRQTLPVLSNVLMVVDDSKLSLTATDLEVELKAQVELE 60

Query: 61  VE-RAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPV 119
            E   G  TVPA  L +IVR L DG  V +  + ++ RL++    S FSL+T+   +FP 
Sbjct: 61  GEFEPGEITVPARKLLDIVRSLGDGENVKV--EQSETRLKLITPSSRFSLSTMSANEFPN 118

Query: 120 MTTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDG 179
           +  T    +      +L+ L +K++FA++ ++ RYYLNG+       +N R L  VATDG
Sbjct: 119 LDETASLASLELTQEILKTLIEKTQFAMAQQDVRYYLNGMLFEF---DNDR-LTTVATDG 174

Query: 180 HRLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEITLT 239
           HRLA   A +    E     I+PRK V EL +LLE  E +I +++    I+    + + T
Sbjct: 175 HRLALSRAKVSIDTEDKISAIIPRKGVTELARLLEHSEEKITLNLGSNHIKVIGEDYSFT 234

Query: 240 SKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLILS 299
           SK++DG FP+Y +V+P +  + +  D   F +++ R + + +E+ R V+  L  +++ L 
Sbjct: 235 SKLVDGRFPEYDKVLPRNGDKIVIADRELFKESLSRASILCNEKFRGVRFMLSNEQVRLH 294

Query: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMREGS 359
            N P+   AE E  V Y    LEIGFN  Y++++ + +        F  A   T++ E  
Sbjct: 295 ANNPEQEEAEVEFGVEYQGTDLEIGFNVSYMIDVMNTIKTPQVKLTFIDANSSTLIEEVD 354

Query: 360 DSSAIYVVMPMRV 372
              ++YVVMPMR+
Sbjct: 355 GGESLYVVMPMRL 367