Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 400 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 118/520 (22%), Positives = 192/520 (36%), Gaps = 124/520 (23%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M++I TN  +M A + L + +S+L+ +   +S+G  V +AKD+AA  +IS+ M A V+G 
Sbjct: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVAS---QEENVDRAKIQTDIDALKE 117
                + + G S    A  A   V D+L  ++   V S      + DR  +Q ++  L +
Sbjct: 61  NVAVRNANDGISLAQTAEGALGKVGDMLQRMRELSVQSANASNNSSDRTALQAEVTQLSQ 120

Query: 118 QIGSVISAAQFNGKNLVNSYDQSSILSSLDRDSSGTVTANSISFTGQNLTSASGTLETAS 177
           +I  V     FNG  L++                    AN+    G N           S
Sbjct: 121 EIDRVAKTTAFNGTKLLDG-----------------SFANATFQVGANAGEGIAIDSIVS 163

Query: 178 A-LDRIGTIDDAGTYTVGNGASLTNTANTTDLVLANDLADSATLNISFGDQQFSYTNTTG 236
             LD +G+    G  T+           +T++VL                          
Sbjct: 164 VKLDSMGSPSSMGYTTI---------QVSTEMVLG------------------------- 189

Query: 237 SAIAVADLSNIVAAGLSNLGVEGVTTTSDGVDTVTIASTNKFEAIAIQGSSSGATTVDVN 296
              ++ DL+ + A  L    V G  T++  +  +      K  A A + +      V+  
Sbjct: 190 ---SLTDLTAVTAGTLQINAVPGDNTSAVSLGAI------KAAANATERAGQIVDAVNAR 240

Query: 297 GAGAGVEETLVARAETVSLGGAGNTGGVVNEGDGFQIALGGQAFNYVAKDGDTLNDVATG 356
            A  GV   L           + N  G +    G+ +     AF+  A D    N  ATG
Sbjct: 241 SADTGVFAKL-----------SYNAAGALT---GYHLFSEKTAFS-AAADLAGFNTAATG 285

Query: 357 LKRVLDAGGLEGIEVKVNISDDPTIDPPTIQIDNDGATAVALTVDDGADGVASGGLVGLD 416
               L AG +               D   I + + G   ++L + D A    +     L 
Sbjct: 286 ---NLQAGAMFA----------GAYDMRGISVASAGGAQLSLKIIDKAINDVNSSRANLG 332

Query: 417 GIDVTTQEGAENALANIESLIETSIDAAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLV 476
            +    Q   ENA+ANI+   E                            ++ +  G +V
Sbjct: 333 AL----QSRFENAVANIQITGE----------------------------NISAARGRIV 360

Query: 477 DADMEEASARLQALQVQQQLGTQSLSIANQAPQNILALFR 516
           DAD  + ++ L   Q+ QQ GT  ++ ANQA Q +L+L R
Sbjct: 361 DADFAKETSSLSRAQILQQAGTAMVAQANQAQQGVLSLLR 400