Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 390 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 3/206 (1%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M++I TN  +M A + L + +S+L+ +   +S+G  V +AKD+AA  +IS+ M A V+G 
Sbjct: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVAS---QEENVDRAKIQTDIDALKE 117
              + + + G S    A  A   V D+L  ++   V S      + DR  +Q ++  L+ 
Sbjct: 61  SVAARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRS 120

Query: 118 QIGSVISAAQFNGKNLVNSYDQSSILSSLDRDSSGTVTANSISFTGQNLTSASGTLETAS 177
           +I  V     FNG  L++    ++          G    + +S     L   S T    +
Sbjct: 121 EIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTALGQLSATEHFVA 180

Query: 178 ALDRIGTIDDAGTYTVGNGASLTNTA 203
           A+    T  +A       G S+ N A
Sbjct: 181 AVAAPSTAANAAIPAGTAGWSIKNAA 206



 Score = 68.9 bits (167), Expect = 3e-16
 Identities = 97/398 (24%), Positives = 150/398 (37%), Gaps = 44/398 (11%)

Query: 153 TVTANSISFTGQ-NLTSASGTLETASALDRIGT---IDDAGTYTVGNGASLTNTANTTDL 208
           T+  N +S T Q NL + S +L  A+++ R+ +   ++ A     G   S    A    L
Sbjct: 3   TINTNVMSMTAQRNLGTTSSSL--ATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 209 VLANDLADSATLNISFGDQQFSYTNTTGSAIAVADLSNIVAAGLSNLGVEG------VTT 262
            +A   A +A   IS            G  +       + +A  SN   +       VT 
Sbjct: 61  SVA---ARNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQ 117

Query: 263 TSDGVDTVTIASTNKFEAIAI-QGSSSGATTVDVNGAGAGVEETLVARAETVSLGG---- 317
               +D V  A T  F    +  G+ + AT      AG G+    +  A + +LG     
Sbjct: 118 LRSEIDRV--AKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTALGQLSAT 175

Query: 318 -------------------AGNTGGVVNEGDGFQIALGGQAFNYVAKDGDTLNDVATGLK 358
                              AG  G  +    G  +ALGG   +  A    T   V   + 
Sbjct: 176 EHFVAAVAAPSTAANAAIPAGTAGWSIKNAAGVDVALGGIGASTTAAQRTT--QVVDAIN 233

Query: 359 RVLDAGGLEGIEVKVNISDDPTIDPPTIQIDNDGATAVALTVDDGADGVASGGLVGLDGI 418
                 G+   E      +  +    T   D   A   A T   G D    G L  L  I
Sbjct: 234 AKSADTGVFARETGAGAYEIFSSRDLTAATDFGAAFTAAATGAPG-DTAPPGTLTTLSAI 292

Query: 419 DVTTQEGAENALANIESLIETSIDAAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLVDA 478
           +V +   A+ AL  I+  I +   + A  G++QSR E     I    +++ +  G +VDA
Sbjct: 293 NVNSFGDAQKALQVIDKAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDA 352

Query: 479 DMEEASARLQALQVQQQLGTQSLSIANQAPQNILALFR 516
           D  + ++ L   Q+ QQ GT  ++ ANQA Q +L+L R
Sbjct: 353 DFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 390