Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 381 a.a., Flagellin protein flaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 27/294 (9%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M++I TN  +M A + L + +S+L+ +   +S+G  V +AKD+AA  +IS+ M A V+G 
Sbjct: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVAS---QEENVDRAKIQTDIDALKE 117
              S + + G S    A  A   V D+L  ++   V S      + DR  +Q ++  L+ 
Sbjct: 61  SVASRNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRS 120

Query: 118 QIGSVISAAQFNGKNLVNSYDQSSILSSLDRDSSG-----TVTANSISFTGQNLTSASGT 172
           +I  V     FNG  L++    ++          G      V+ANS S    +L + +GT
Sbjct: 121 EIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTSLGNTSLVTGAGT 180

Query: 173 LET---ASALDRIGTIDDAGTYTVGNGASLTNTANTTDLVLANDLADS---------ATL 220
           + +   A+     G +   GT      A+ +    TT +V A +   S          T 
Sbjct: 181 ITSTAGANVAIAAGALTVKGTALGPIAAAASAAERTTQVVDAINAKSSDTGVFARATYTA 240

Query: 221 NISFGDQQFSYTNTTGSAIAVADLSNIVAAGLSNLGVEGVTTTSDGVDTVTIAS 274
            ++ G + FS       AIAVAD     AA    + V     +   +D + ++S
Sbjct: 241 GVATGFETFS-----EGAIAVADFGGFTAAATGTVAVGAAAASQ--LDDINVSS 287



 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 98/389 (25%), Positives = 159/389 (40%), Gaps = 35/389 (8%)

Query: 153 TVTANSISFTGQ-NLTSASGTLETASALDRIGT---IDDAGTYTVGNGASLTNTANTTDL 208
           T+  N +S T Q NL + S +L  A+++ R+ +   ++ A     G   S    A    L
Sbjct: 3   TINTNVMSMTAQRNLGTTSSSL--ATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 209 VLANDLADSATLNISFGDQQFSYTNTTGSAIAVADLSNIVAAGLSNLGVEG------VTT 262
            +A+  A+     IS            G  +       + +A  SN   +       VT 
Sbjct: 61  SVASRNANDG---ISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQ 117

Query: 263 TSDGVDTVTIASTNKFEAIAI-QGSSSGATTVDVNGAGAGVEETLVARAETVSLGGAG-- 319
               +D V  A T  F    +  G+ + AT      AG G+    +  A + SLG     
Sbjct: 118 LRSEIDRV--AKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSTSLGNTSLV 175

Query: 320 NTGGVVNEGDGFQIALGGQAFNYVAKDGDTLNDVATGLKR---VLDAGGLEGIEVKVNIS 376
              G +    G  +A+   A          +   A+  +R   V+DA   +  +  V   
Sbjct: 176 TGAGTITSTAGANVAIAAGALTVKGTALGPIAAAASAAERTTQVVDAINAKSSDTGVFAR 235

Query: 377 DDPTIDPPT-IQIDNDGATAVALTVDDGADGVASGGLVG--------LDGIDVTTQEGAE 427
              T    T  +  ++GA AVA   D G    A+ G V         LD I+V++   A+
Sbjct: 236 ATYTAGVATGFETFSEGAIAVA---DFGGFTAAATGTVAVGAAAASQLDDINVSSFGDAQ 292

Query: 428 NALANIESLIETSIDAAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLVDADMEEASARL 487
            AL  I++ I +   + A  G++QSR E     I    +++ +  G +VDAD  + ++ L
Sbjct: 293 KALKVIDNAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDADFAKETSNL 352

Query: 488 QALQVQQQLGTQSLSIANQAPQNILALFR 516
              Q+ QQ GT  ++ ANQA Q +L+L R
Sbjct: 353 SRAQILQQAGTAMVAQANQAQQGVLSLLR 381