Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 382 a.a., Flagellin protein FlaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 83.6 bits (205), Expect = 1e-20
 Identities = 80/293 (27%), Positives = 130/293 (44%), Gaps = 17/293 (5%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M++I TN  +M A + L + +S+L+ +   +S+G  V +AKD+AA  +IS+ M A V+G 
Sbjct: 1   MTTINTNVMSMTAQRNLGTTSSSLATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVAS---QEENVDRAKIQTDIDALKE 117
              S + + G S    A  A   V D+L  ++   V S      + DR  +Q ++  L+ 
Sbjct: 61  SVASRNANDGISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQLRS 120

Query: 118 QIGSVISAAQFNGKNLVNSYDQSSILSSLDRDSSG-----TVTANSISFTGQNLTSASGT 172
           +I  V     FNG  L++    ++          G      V+ANS S    +L +++  
Sbjct: 121 EIDRVAKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSASLGNTSLATSTSA 180

Query: 173 LETASALDRIGTIDDAGTYTVGNGASLTNTANTTDLVLANDLADSATLNISFGDQQFSYT 232
           +   +AL  I     AGT TV  G +L   A  T     N     A    S     F+ T
Sbjct: 181 INDGTALTAIA----AGTLTV-RGVALGPVAVATTAAERNTQVVDAINAKSSDTGVFART 235

Query: 233 --NTTGSAIAVADLSNIVAAGLSNLGVEGVTTTSDGVDTVTIASTNKFEAIAI 283
             N  G+A      S+      S +G    TT +   D+   A+T++ E I++
Sbjct: 236 TYNAGGAATGFEVFSDTAITAASFVGFGATTTGAAPADSA--AATSQLEDISV 286



 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 97/398 (24%), Positives = 155/398 (38%), Gaps = 52/398 (13%)

Query: 153 TVTANSISFTGQ-NLTSASGTLETASALDRIGT---IDDAGTYTVGNGASLTNTANTTDL 208
           T+  N +S T Q NL + S +L  A+++ R+ +   ++ A     G   S    A    L
Sbjct: 3   TINTNVMSMTAQRNLGTTSSSL--ATSMQRLSSGLRVNSAKDDAAGLAISERMNAQVRGL 60

Query: 209 VLANDLADSATLNISFGDQQFSYTNTTGSAIAVADLSNIVAAGLSNLGVEG------VTT 262
            +A+  A+     IS            G  +       + +A  SN   +       VT 
Sbjct: 61  SVASRNANDG---ISLAQTAEGALGKVGDMLQRMRELAVQSANASNNSSDRTALQAEVTQ 117

Query: 263 TSDGVDTVTIASTNKFEAIAI-QGSSSGATTVDVNGAGAGVEETLVARAETVSLGGAG-- 319
               +D V  A T  F    +  G+ + AT      AG G+    +  A + SLG     
Sbjct: 118 LRSEIDRV--AKTTSFNGTKLLDGTFANATFQVGANAGEGIAIDSIVSANSASLGNTSLA 175

Query: 320 NTGGVVNEGDGFQ-----------IALGGQAFNYVAKDGDTL---------NDVATGLKR 359
            +   +N+G               +ALG  A    A + +T          +D     + 
Sbjct: 176 TSTSAINDGTALTAIAAGTLTVRGVALGPVAVATTAAERNTQVVDAINAKSSDTGVFART 235

Query: 360 VLDAGGLE-GIEVKVNISDDPTIDPPTIQIDNDGATAVALTVDDGADGVASGGLVGLDGI 418
             +AGG   G EV    SD        +     GAT       D A   +      L+ I
Sbjct: 236 TYNAGGAATGFEV---FSDTAITAASFVGF---GATTTGAAPADSAAATSQ-----LEDI 284

Query: 419 DVTTQEGAENALANIESLIETSIDAAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLVDA 478
            V +   A+ AL  I++ I +   + A  G++QSR E     I    +++ +  G +VDA
Sbjct: 285 SVNSFGDAQKALKVIDTAINSINSSRADLGALQSRFENAVANIQITGENISAARGRIVDA 344

Query: 479 DMEEASARLQALQVQQQLGTQSLSIANQAPQNILALFR 516
           D  + ++ L   Q+ QQ GT  ++ ANQA Q +L+L R
Sbjct: 345 DFAKETSNLSRAQILQQAGTAMVAQANQAQQGVLSLLR 382