Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 2e-38
 Identities = 99/293 (33%), Positives = 159/293 (54%), Gaps = 7/293 (2%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M+SILTNN+AM AL TL+SI S+LS TQD IS+G  V +A DNAA WSI+  M +D K  
Sbjct: 1   MASILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKAL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVASQEENVDRAKIQTDIDALKEQIG 120
            A+S++L +G + V  A    +    ++T+IK K+VA++E+ VD+ K+Q ++  L +Q+ 
Sbjct: 61  GAVSDALGMGAAKVDTASAGMDAAIKVVTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQLK 120

Query: 121 SVISAAQFNGKN-LVNSYDQS-SILSSLDRDSSGTVTANSISFTGQNLTSASGTLETASA 178
           S+ ++A FNG+N LV+S + + +++S   RD+ GTV+  +  +   +  S   T  T   
Sbjct: 121 SIGTSASFNGENWLVSSANATKTVVSGFVRDAGGTVSVKTTDY-ALDANSMLYTEGTPGT 179

Query: 179 LDRIGTIDDAGTYTVGNGASLTNTANTTDLVLANDLADSATLNISFG-DQQFSYTNTTGS 237
           +D    I +A   T   GA      +  D+ +  D  D+A  ++     +  S     GS
Sbjct: 180 IDANSGILNATGATTTVGAKTYTQISVLDMNVGTDDLDNALYSVETALTKMTSAGAKLGS 239

Query: 238 AIAVADLSNIVAAGLSNLGVEGVTTTSD---GVDTVTIASTNKFEAIAIQGSS 287
             A  DL +  A  LS+   +GV    D     ++  + +    + +AIQ  S
Sbjct: 240 LSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQQLAIQALS 292



 Score =  102 bits (255), Expect = 1e-26
 Identities = 96/314 (30%), Positives = 144/314 (45%), Gaps = 44/314 (14%)

Query: 234 TTGSAIAVADLSNIVAAGLSNL------GVEGVTTTSDGVDTVTIASTNKFEAIAIQGSS 287
           T  +A+A       +A+ LS        G++ V + SD     +IA+T + +  A+   S
Sbjct: 6   TNNNAMAALSTLRSIASDLSTTQDRISSGLK-VGSASDNAAYWSIATTMRSDNKALGAVS 64

Query: 288 S----GATTVDVNGAG--AGVEETLVARAETVSLGGAGNTGGVVNE----------GDGF 331
                GA  VD   AG  A ++     +A+ V+    G     V E            G 
Sbjct: 65  DALGMGAAKVDTASAGMDAAIKVVTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQLKSIGT 124

Query: 332 QIALGGQAFNYVAKDGDTLNDVATGLKRVLDAGGLEGIEVKVNISDDPTI-----DPPTI 386
             +  G+  N++    +    V +G  R  DAGG   ++      D  ++      P TI
Sbjct: 125 SASFNGE--NWLVSSANATKTVVSGFVR--DAGGTVSVKTTDYALDANSMLYTEGTPGTI 180

Query: 387 QIDNDGATAVALTVDDGADGVASGGL----VGLDGIDVTTQEGAENALANIESLIETSID 442
             ++    A   T   GA       +    VG D +D        NAL ++E+ +     
Sbjct: 181 DANSGILNATGATTTVGAKTYTQISVLDMNVGTDDLD--------NALYSVETALTKMTS 232

Query: 443 AAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLVDADMEEASARLQALQVQQQLGTQSLS 502
           A A+ GS+ +RI+ QS F  KL+D+++ G+G LVDADM E S +L+ALQ QQQL  Q+LS
Sbjct: 233 AGAKLGSLSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQQLAIQALS 292

Query: 503 IANQAPQNILALFR 516
           IAN   QNIL+LFR
Sbjct: 293 IANSDSQNILSLFR 306