Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 320 a.a., flaB from Agrobacterium fabrum C58

 Score =  122 bits (305), Expect = 2e-32
 Identities = 76/237 (32%), Positives = 123/237 (51%), Gaps = 18/237 (7%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M+SI+TN +AM ALQTL+SI  N+  TQ  +S+G  V  A DNAA WSI+  M +D    
Sbjct: 1   MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVASQEENVDRAKIQTDIDALKEQIG 120
            ++S++L LG + V  A     +  D++ EIK K+V + EE VDR K+Q +I  L++Q+ 
Sbjct: 61  SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA 120

Query: 121 SVISAAQFNGKNLV-----------NSYDQSSILSSLDRDSSGTVTANSISFTGQNLTSA 169
           S+   A F G+N +            +    S+++   R S G V+  +  +   N  + 
Sbjct: 121 SISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYALDNTATG 180

Query: 170 S---GTLETASALDRIGTIDDAGTYTVGNGASLTNTANTTDLVLAN---DLADSATL 220
           +   G+++     D  G +   GT+T    A    T + T    A+   ++A++ TL
Sbjct: 181 NVLFGSVDGTGTPDASGILGTVGTFTT-VAAQSVYTLDITQYAAADRATNMAEALTL 236



 Score = 97.1 bits (240), Expect = 9e-25
 Identities = 62/147 (42%), Positives = 83/147 (56%), Gaps = 18/147 (12%)

Query: 388 IDNDGATAVALTVDDGADGVASGGLVGLDG------------IDVTTQEGAENA--LANI 433
           +DN     V     DG     + G++G  G            +D+T    A+ A  +A  
Sbjct: 174 LDNTATGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEA 233

Query: 434 ESLIETSI----DAAAQFGSVQSRIETQSDFIGKLTDSLKSGIGSLVDADMEEASARLQA 489
            +L+E S+     AAA+ GS+  RI  Q DF  KL+DS++ GIG LVDADM E S RL+A
Sbjct: 234 LTLVENSLKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKA 293

Query: 490 LQVQQQLGTQSLSIANQAPQNILALFR 516
           LQ QQQLG Q+LSIAN   ++IL+LFR
Sbjct: 294 LQTQQQLGVQALSIANSNSESILSLFR 320