Pairwise Alignments

Query, 679 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 591 a.a., ATP-dependent DNA helicase RecQ from Variovorax sp. SCN45

 Score =  487 bits (1253), Expect = e-142
 Identities = 281/592 (47%), Positives = 360/592 (60%), Gaps = 35/592 (5%)

Query: 28  VCAGEDVLAIMPTGGGKSLCFQLPALARE----GLTVVISPLIALMRDQVRGLREAGVAA 83
           V  G D L +MPTGGGKSLC+Q+PA+AR+    G+ +V+SPLIALM DQV  L EAGV+A
Sbjct: 1   VVGGGDALVLMPTGGGKSLCYQIPAIARQRAGHGVAIVVSPLIALMHDQVGALHEAGVSA 60

Query: 84  GALTSGNTPEETDAVFEALEDGSLKILYMAPERLAHGGTVRLLS-------RAGVGLLAV 136
             L S    EET  V   +  G + +LY APER+    T R LS       R  + L A+
Sbjct: 61  AFLNSTLDWEETQDVERRMLRGEITLLYAAPERV---NTPRFLSQLDSLKERGKLSLFAI 117

Query: 137 DEAHCVSQWGHDFRPDYLRIGDLR-RALDVPVAAFTATADAETRDEIIARLFPDTAPRVF 195
           DEAHCVSQWGHDFRP+Y  +  L  R   VP  A TATAD  TR +I+ RL  + A R F
Sbjct: 118 DEAHCVSQWGHDFRPEYRALTVLHERYAGVPRIALTATADDLTRADIVERLQLEEA-RQF 176

Query: 196 LRGFDRPNIHLAFAAKDSPRRQILDFAGAR-KGQSGIVYCGTRAKTEGLAQALREAGHMA 254
           +  FDRPNI      K     Q+L F     +G +G+VYC +R + E +A  LR+AG  A
Sbjct: 177 VSSFDRPNIRYTIVEKKDATTQLLRFIEREHEGDAGVVYCQSRKRVEDVAVTLRDAGINA 236

Query: 255 CHYHGGMEAEDRRIVETRFQREDSLIVVATVAFGMGVDKPDIRWVAHADLPKSIEAYYQE 314
             YH G++A  R+  + RF RE+ +++VAT+AFGMG+DKPD+R+V H D+PK+IE YYQE
Sbjct: 237 LPYHAGLDAAVRQKHQDRFLREEGIVMVATIAFGMGIDKPDVRFVGHLDMPKNIEGYYQE 296

Query: 315 IGRAGRDGAPAETLTLFGPDDIRLRRSQIDEGLAPPERKGADHGRLNALLGLAEALRCRR 374
            GRAGRDG PA+    +G  D+  +R  IDE  A  E K    G+L+ALL LAEA  CRR
Sbjct: 297 TGRAGRDGGPADAWMAYGLQDVVNQRRMIDESPAGEEFKQVMRGKLDALLSLAEASDCRR 356

Query: 375 QVLLSYFGEDSAACGNCDLCDTAPEVFDGTDAVRKALSAVLR----TGESFGAGHLIDIL 430
             LL YFGE S  CGNCD C   P+V+DGTDA RK LS + R    +G SFGAGH++DIL
Sbjct: 357 VRLLGYFGEKSTPCGNCDNCLNPPQVWDGTDAARKLLSTIYRVQQLSGISFGAGHIMDIL 416

Query: 431 TGNATDKVRQRGHEDLPTFGVGRDLDKRTWQGVFRQMMGHDLLRPDAARHGALVMTDAAR 490
            G AT+KV+Q GHE + TFG+G +  +   +GV RQ++    L  DA     L +T+ +R
Sbjct: 417 RGKATEKVKQFGHERVSTFGIGAEFSEVALRGVLRQLIATGALAVDAEAFNTLKLTEGSR 476

Query: 491 PLLRGETTIEL-------------RRDTLRKAAHRPAVRALVSDEDAPLLSALKAKRRAL 537
            +LRGE  + L             RR+   K A  PA  A + D       ALKA R  +
Sbjct: 477 AVLRGEAQVTLRESVSSPAERSKSRREKTVKGAPSPAA-AKLDDTGKKRFEALKAWRAEV 535

Query: 538 AEAAGVPAYVIFTDRSLIEMAERRPDTLDAFAGISGVGAKKLEKYGAAFLEV 589
           A+   +PAYVIF D +L  +AER P TL+   GISG+G KKLE YG+  L V
Sbjct: 536 AKEHNLPAYVIFHDATLAAIAERAPATLEDLQGISGIGTKKLEAYGSEVLRV 587