Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 283 a.a., Flagellar motor rotation protein from Pseudomonas putida KT2440

 Score =  184 bits (466), Expect = 3e-51
 Identities = 106/284 (37%), Positives = 166/284 (58%), Gaps = 5/284 (1%)

Query: 1   MIGIIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTL 60
           M  IIGI+VVF  V GGY+ + GK+  +++  PFE+ +IGGAA GAF+  N      H +
Sbjct: 1   MAKIIGIIVVFASVLGGYVLSHGKIAALIQ--PFEVLIIGGAAFGAFLQANPGHMTMHVI 58

Query: 61  KDVKKVFKGPTWLAQDYKDLLCLLFELIRLAR-QNPVGLEEHIEDPAASNIFSKYPKIMA 119
           K   K+F G  +    Y ++L L++E++  +R +  + +E  IED AAS IF+KYP ++A
Sbjct: 59  KKSMKMF-GSRFSHAFYLEVLGLVYEILNKSRREGMMAIEADIEDAAASPIFAKYPTVLA 117

Query: 120 DREAIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIV 179
           D      + D +R  +     PH++E + +  + S  E   H SHA+  +ADG+P  GIV
Sbjct: 118 DERMTAFVCDYLRIMSTGNMAPHELEGLFDMELLSMKEELEHPSHAVTGIADGMPGFGIV 177

Query: 180 AAVLGVIKTMGSI-DQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHF 238
           AAVLG++ TM S+ D     +G  +G ALVGTF G+  AYG  GP +  ++   +E+ + 
Sbjct: 178 AAVLGIVVTMASLGDGDQAAIGMHVGAALVGTFFGILAAYGFFGPLAKCLEHDAKEELNL 237

Query: 239 YLLIREVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALK 282
           Y  I+  LVA+      +  +E GR+      RP+F++LE+A++
Sbjct: 238 YESIKASLVASASGMPPSLAVEFGRKVLYPKHRPSFAELEQAVR 281