Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 306 a.a., Flagellar motor rotation protein MotA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  162 bits (409), Expect = 1e-44
 Identities = 88/284 (30%), Positives = 158/284 (55%), Gaps = 6/284 (2%)

Query: 5   IGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTLKDVK 64
           +G +V+ + VFGG+L  GG + ++ +  P E+ +IGGA +GA ++GN    +      ++
Sbjct: 5   VGALVILLTVFGGFLLGGGDLAVVWE--PVELLIIGGAGLGAIIVGNPRHVLSEMGIQLR 62

Query: 65  KVFKGPTWLAQDYKDLLCLLFELIRLARQNPVGLEEHIEDPAASNIFSKYPKIMADREAI 124
           K+        +  + LL L++EL++ A      L+ H+E+P  S IF KYP ++ + + +
Sbjct: 63  KLVGSRKEGEEFQRQLLLLMYELLQTAAGGIKALDAHVEEPHKSAIFLKYPLVLDEPKLL 122

Query: 125 DLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIVAAVLG 184
             I D  R  A+   + H++E VLE+ +E+ HE     + +L  + + +P  GI+AAVLG
Sbjct: 123 HFIVDNFRLMAIGKINAHELEGVLEQELEAIHEELNQPAKSLHKIGEAMPGFGILAAVLG 182

Query: 185 VIKTMGSI---DQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFYLL 241
           ++  M S+       EI  K +  A+VGTF+G+F+ Y ++ P S  +K +V+E+      
Sbjct: 183 IVMAMNSVAAGASAGEIAAK-VAAAMVGTFIGIFMCYAVLDPISNMMKQLVKEEMSHMEA 241

Query: 242 IREVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALKQLK 285
           ++ VLV ++        I+ GR+    +I+P+FS LE  +  L+
Sbjct: 242 VKVVLVTHVSGKVALLAIDAGRRLVQLNIKPSFSKLESWINALE 285