Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 285 a.a., Flagellar motor rotation protein MotA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  228 bits (580), Expect = 2e-64
 Identities = 116/284 (40%), Positives = 180/284 (63%), Gaps = 1/284 (0%)

Query: 1   MIGIIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTL 60
           M  IIG VV  V +FG ++  GG +G++LK+LPFE+T I GAA+GAF+I N M  +K + 
Sbjct: 1   MFVIIGFVVSMVCIFGVFIFHGGNIGVVLKALPFELTTILGAALGAFLINNQMKVVKASF 60

Query: 61  KDVKKVFKGPTWLAQDYKDLLCLLFELIRLARQNPV-GLEEHIEDPAASNIFSKYPKIMA 119
           K + + FKG  +    Y +LL LLF++++ AR+  +  +E+ +E+P  S +F KYP I A
Sbjct: 61  KGLAQCFKGSRYTKARYMELLALLFDILQKARKEGLMAIEQDVENPHESALFKKYPTIAA 120

Query: 120 DREAIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIV 179
           D   ++ I D +R       + H++E +++  IE++H+ A     A+  +A GLPA GIV
Sbjct: 121 DHHVVEFITDYLRMMVSGNLNAHEIESLMDAEIETHHQEAHAPVAAIGRLAGGLPAFGIV 180

Query: 180 AAVLGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFY 239
           AAVLGV+ TMGS+ QPP +LG +IG ALVGTFLG+ LAYG+  P    +   +EE +   
Sbjct: 181 AAVLGVVNTMGSVGQPPAVLGAMIGSALVGTFLGILLAYGVFEPLGGLLDQKMEEGSKEL 240

Query: 240 LLIREVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALKQ 283
           L ++  L++++  +     IE GR+   + +RPTF++LE  +K+
Sbjct: 241 LCVKTTLLSSMQGYAPLTAIEFGRKVLFADVRPTFAELETHVKK 284