Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 296 a.a., flagellar motor stator protein MotA from Serratia liquefaciens MT49

 Score =  197 bits (500), Expect = 3e-55
 Identities = 106/289 (36%), Positives = 171/289 (59%), Gaps = 3/289 (1%)

Query: 1   MIGIIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTL 60
           M+ I+G +VV   VFGGYL  GG +G + +  P E  +IGGA +GAF++GN+   IK TL
Sbjct: 1   MLVILGYLVVLGAVFGGYLIVGGHLGALYQ--PAEFLIIGGAGIGAFIVGNNGKAIKSTL 58

Query: 61  KDVKKVFKGPTWLAQDYKDLLCLLFELIRLARQNPV-GLEEHIEDPAASNIFSKYPKIMA 119
           + + K+ +   +    Y DL+ LLF L+  +RQ  +  LE  I++P  S IFS YP+I+A
Sbjct: 59  RAIPKLMRRSKYSKDLYMDLMALLFRLLAKSRQQGMLSLEFDIDNPQESEIFSNYPRILA 118

Query: 120 DREAIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIV 179
           D   ++ I D +R       +  ++E ++++ IE+  + +   + +L  V D LPA GIV
Sbjct: 119 DNTLVEFITDYLRLMVSGNMNAFEIEALMDEEIETFEQESEVPAGSLAMVGDSLPAFGIV 178

Query: 180 AAVLGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFY 239
           AAV+GV+  + S D+P   LG LI  A+VGTFLG+ LAYG + P +  ++    E+    
Sbjct: 179 AAVMGVVHALASADRPAAELGALIANAMVGTFLGILLAYGFISPLATLLRQKSAENVKMM 238

Query: 240 LLIREVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALKQLKQEA 288
             I+  L+++L+ +     +E GR+   +  RP+F +LEE ++++K  A
Sbjct: 239 QCIKVTLLSSLNGYAPQIAVEFGRKTLYTTERPSFVELEEHVRRVKAPA 287