Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 295 a.a., Flagellar motor rotation protein MotA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  196 bits (498), Expect = 5e-55
 Identities = 104/283 (36%), Positives = 168/283 (59%), Gaps = 3/283 (1%)

Query: 4   IIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTLKDV 63
           ++G +VV   VFGGY+  GG +G + +  P E+ +IGGA +GAF++GN+   IK T+K +
Sbjct: 4   LLGYLVVIGTVFGGYVMTGGHLGALYQ--PAELVIIGGAGIGAFIVGNNGKAIKGTMKAI 61

Query: 64  KKVFKGPTWLAQDYKDLLCLLFELIRLARQNPV-GLEEHIEDPAASNIFSKYPKIMADRE 122
             +F+   +    Y DLL LL+ L+  +RQ  +  LE  IE+P  S IF+ YP+I+AD  
Sbjct: 62  PLLFRRSKYTKSMYMDLLALLYRLMAKSRQQGMFSLERDIENPKESEIFASYPRILADAV 121

Query: 123 AIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIVAAV 182
            +D I D +R       +  ++E ++++ IE++   A   +++L  V D LPA GIVAAV
Sbjct: 122 MLDFIVDYLRLIISGNMNTFEIEALMDEEIETHESEAEVPANSLAMVGDSLPAFGIVAAV 181

Query: 183 LGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFYLLI 242
           +GV+  + S D+P   LG LI  A+VGTFLG+ LAYG + P +  ++    E       +
Sbjct: 182 MGVVHALASADRPAAELGALIAHAMVGTFLGILLAYGFISPLATVLRQKSAETTKMMQCV 241

Query: 243 REVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALKQLK 285
           +  L++NL+ +     +E GR+   S  RP+F +LEE ++ ++
Sbjct: 242 KITLLSNLNGYAPPIAVEFGRKTLYSSERPSFIELEEHVRAVR 284