Pairwise Alignments

Query, 698 a.a., flagellar biosynthesis protein FlhA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 692 a.a., flagellar biosynthesis protein FlhA from Escherichia coli ECOR38

 Score =  404 bits (1037), Expect = e-116
 Identities = 244/667 (36%), Positives = 377/667 (56%), Gaps = 18/667 (2%)

Query: 21  IMLLGIIVMMILPMPSIVLDIGLALSFSLSILIFTVTLFINRPLDFSAFPTVLLASLMLR 80
           I++L I+ MM+LP+P+ +LD+    + +LSI++  V +F  R L+F+AFPT+LL + +LR
Sbjct: 26  ILILLILSMMVLPLPAFILDLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLR 85

Query: 81  LSLNVSSTKLIIGQGHEGTHAAGGVIEGFANFVMGGSIFLGLVVFLVLLIVNFIVITKGA 140
           L+LNV+ST++I+ +GH G  AAG V+E F +F++GG+  +G+VVF++L+I+NF+VITKGA
Sbjct: 86  LALNVASTRIILMEGHTGAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGA 145

Query: 141 SRMAEVGARFALDGMPGKQLAIDADMSAGAIDHAEAKRRRETEQAETTFFGSLDGASKFV 200
            R+AEVGARF LDGMPGKQ+AIDAD++AG I   EAK+RR     E  F+GS+DGASKFV
Sbjct: 146 GRIAEVGARFVLDGMPGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFV 205

Query: 201 KGDAVAGLLITALNLIMGLVIGMTLHDMPLGEAFRTYSILTVGDGLVTQIPAVIISIAAA 260
           +GDA+AG+LI  +N++ GL++G+  H M +G A  +Y++LT+GDGLV QIPA++IS AA 
Sbjct: 206 RGDAIAGILIMVINVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAG 265

Query: 261 LLLAKGGSDEKADIAISAQFGRHPAALATVGFMMFLFALIPGLPFIPFTLGAMVLGGAAL 320
           +++ +  +D+     +  Q   +P+ +     ++ L  L+PG+P + F L    L G A 
Sbjct: 266 VIVTRVSTDQDVGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAW 325

Query: 321 YLYRKTPDSPEGEDKPA--AQTDRPREATMGDILDVDEIHVTFSTDLVSSI-LDAAGGLD 377
           ++  +   +P  E KP   A+ +   EAT  D+   D + +     L+  +     G L 
Sbjct: 326 WIRGREQKAP-AEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELL 384

Query: 378 TRIQSMRNHIASEFGVILPEIRLTDDAGLPDASYAIFLHGVEEARGQLYPDRILLLLPEE 437
            RI+S+R   A E G + P + + D+  L  A Y I + GVE   G  YP R L + P  
Sbjct: 385 GRIRSIRKKFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGT 444

Query: 438 GFREPTEYDVKEPVYGAPARWIEKSERDEVSLLGMTTVASTEVLATHLLEVVKGNLARLM 497
                      +P +G  A WIE + +++  + G T V ++ V+ATHL  ++  + A L 
Sbjct: 445 AAGTLPGEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELF 504

Query: 498 TLKALRKLIGELTNTADAARNEANRLLVEELIPDRVTNDTLIAILRLLLEERVSIRNLPL 557
             +  ++L+       D    E  + L E+L+P  VT  TL  +L+ LL+E+V IR++  
Sbjct: 505 GRQEAQQLL-------DRVAQEMPK-LTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRT 556

Query: 558 ILEAIAEAKQISSAIDGIHEYVRQRLSFQIVSDLKRSDGTIPLIQLAQEWEQIFAANSIG 617
           ILE +AE   I S    +   VR  L   I          + +I L    E++      G
Sbjct: 557 ILETLAEHAPIQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQG 616

Query: 618 REDGAADVALPPDLFQKLIQNASEKVVKANESGVNPAIVTSVRRRRFLSTVLASKGLQVP 677
                    L P L  +L+    E + +    G  P ++ +   R  LS  L     Q+ 
Sbjct: 617 ------GGGLEPGLADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLV 670

Query: 678 VLSFEEL 684
           VLS  EL
Sbjct: 671 VLSNLEL 677