Pairwise Alignments

Query, 257 a.a., type III secretion system inner membrane R protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 260 a.a., flagellar type III secretion system protein FliR from Dickeya dianthicola 67-19

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 6/229 (2%)

Query: 13  FPVFILALLRIGAAMAFLPAFGERAVPLRIKLVLTLALTALVLPTLLATGAPPLERPADW 72
           F  F   L+RI A ++  P F ERA+  R+KL L + +  +V P++  T  P       W
Sbjct: 13  FNQFFWPLVRILALISTAPIFNERAITRRVKLGLGVLIAIVVTPSIPHTSIPVFSATGVW 72

Query: 73  VLAGGAEVVSGLFLGFTFRLMVFALQVAGTIAA--QSTSLAQVFGGAVTPDPQPALGNIF 130
           +L    +V+ G+ LGF  +L   A+++AG I       S A  F  +  P+       + 
Sbjct: 73  MLF--QQVLIGVMLGFAMQLAFVAIRLAGEIIGLQMGLSFATFFDPSGGPNMPVIARFMN 130

Query: 131 LMAGLALAALSGLHVHLTEAFLLSFLLLPVGNFPNSDIISAWAIADVSRMFVVGFTLSAP 190
           L+A L   +++G H+ L    + SF  +P+   P S  +         R+F  G  L+ P
Sbjct: 131 LLALLLFLSMNG-HLWLISLLVDSFHTIPISAEPISGNVFMTLAEAGGRIFSNGLMLALP 189

Query: 191 FVAAAMLYNLALGAINRAMPQLMVAFVGAPALTLGGLALAALSVPFLLT 239
            +   +  N+ALG ++R  PQL +  +G P     G+      V FLL+
Sbjct: 190 LITLLLTINMALGLLSRLAPQLTIFAIGFPITLFAGITTVGFLV-FLLS 237