Pairwise Alignments

Query, 222 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 253 a.a., helix-turn-helix domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 9/176 (5%)

Query: 33  FAKDEALYHFGDSSRGVYGIVAGNVSVSIPNDVGAAQTVYLATPGFWIGDAALFSDQTRL 92
           F   E ++  GD  R ++ + AG V  S+ +  G  Q +    PG  IG  A++ D+   
Sbjct: 59  FHAGEHIFRTGDPFRSIFAVRAGTVKTSMVDPAGREQVLGFYLPGEVIGLNAIYPDRFPC 118

Query: 93  VTVIAETEVDALFLPKAQLDDLVREHPDLLRDFYALSHLNLNVALSLIANLVTPNAAQRL 152
             +  +T     F   A +  L    P + +  + L    L +A  L  +    NA  R+
Sbjct: 119 DAMALDTAYFCRFSFPA-MSALATRMPAVQQRLFRLISKELGMATLLAGD---HNADVRM 174

Query: 153 AAFLLNVDERQVNPG-----DWIQVAQDRLASMVALSTPTVQRHLRNLSAAGLVEI 203
           AAFL ++  R    G       + +++  +A+ + L+  TV R L      GL+E+
Sbjct: 175 AAFLTDLAARYKERGFSGTRFHLSMSRGDIANYLRLAAETVSRVLSRFRQQGLIEL 230