Pairwise Alignments

Query, 222 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 210 a.a., DNA-binding transcriptional dual regulator (NCBI) from Escherichia coli BW25113

 Score = 59.7 bits (143), Expect = 4e-14
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 6/184 (3%)

Query: 33  FAKDEALYHFGDSSRGVYGIVAGNVSVSIPNDVGAAQTVYLATPGFWIGDAALFSD-QTR 91
           +     L H G+ +  +Y IV G+V+V I ++ G    +     G +IG+  LF + Q R
Sbjct: 24  YPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQER 83

Query: 92  LVTVIAETEVDALFLPKAQLDDLVREHPDLLRDFYALSHLNLNVALSLIANLVTPNAAQR 151
              V A+T  +   +   +   L++ +PD+L    A     L V    + NL   +   R
Sbjct: 84  SAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGR 143

Query: 152 LAAFLLNV----DERQVNPGDWIQVAQDRLASMVALSTPTVQRHLRNLSAAGLVEIGYGR 207
           +A  LLN+    D      G  I++ +  +  +V  S  TV R L+ L    L+   +G+
Sbjct: 144 IAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLIS-AHGK 202

Query: 208 MRVI 211
             V+
Sbjct: 203 TIVV 206