Pairwise Alignments

Query, 571 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  400 bits (1028), Expect = e-116
 Identities = 234/592 (39%), Positives = 332/592 (56%), Gaps = 27/592 (4%)

Query: 3   YTAPLNDLRFLLDHVVGFDA-VQATDRFAETTPDVTEAILTEAAKLCEGELAPLQRAGDL 61
           Y APL D+RF+ D ++G++A  Q+     + TPD+ +AIL E AK CE  L+PL R GD 
Sbjct: 4   YKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRVGDQ 63

Query: 62  HPARLENGVVRTSPGFAEGYRAIAAGGWVGMSADPAYGGMGLPMALATCMNEMMSSACLS 121
                    V+T  GF E Y+    GGW  ++ D  +GG GLP +L   ++EM+  +  S
Sbjct: 64  EGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGSNWS 123

Query: 122 LQIAPMMTQGQIEALEAHASDALKALYLPRLTSGDWVGTMNLTEPQAGSDVGALTTKAVP 181
             + P ++ G +  + AH +   +  YL +L SG+W GTM LTEP  G+D+G L TKA P
Sbjct: 124 WGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTKAEP 183

Query: 182 KGDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAGNP 241
           + DG+Y ++G KI+IS G++D   N+ H+VLARLPD   GTKGISLF+VP+ LP+A G  
Sbjct: 184 QADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGV 243

Query: 242 GVANALKVVSLEHKLGLHGSPTAVMQYEGATGWLVGPEHGGMRAMFTMMNNARLGVGVQG 301
           G  N +   S+EHK+G+HG+ T VM ++ ATG+L+GP + G+  MFT MN ARLG  +QG
Sbjct: 244 GERNGVSCGSIEHKMGIHGNATCVMNFDAATGYLIGPANKGLNCMFTFMNTARLGTALQG 303

Query: 302 IGVAEAAYQHALAHARDRKQ------GQTPVADADSILAHADVRRMVMTMRAEVFAARAI 355
           +  AE A+Q  L +AR+R Q       + P   AD I+ H DVRRM++TM+A     RA+
Sbjct: 304 LAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGNRAM 363

Query: 356 ALSTAVATDMHHATGAESWAARA----ALLTPICKAYGTDTGIRVADLGLQVHGGMGVIE 411
              TA   D+   +  E    +A    A LTPI KA+ T+ G   A+ G+Q++GG G I 
Sbjct: 364 VYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGFIA 423

Query: 412 ETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRK-LADGGEAMSRLLDEIEALAESARG--S 468
           E G  Q +RD R++ +YEGT GIQA+DL+GRK L   GEA+      +    ++  G  +
Sbjct: 424 EWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEGNEA 483

Query: 469 LPELAEPVWQACETLRETTEAL-VAETRLNARFGGAQ-PYLM-----AAARVLGGHAHLA 521
           + E  EP+    +   E T  + +A  +     G A   YLM       A      A LA
Sbjct: 484 VKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWADIARLA 543

Query: 522 AAIAEGGRGPRS------ALARFFVGRLLPEHGALAAQALAGDKDLYALDPE 567
           A     G    +        ARF+  R+LP      A  L+G  +L A+D E
Sbjct: 544 AEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEE 595