Pairwise Alignments

Query, 571 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  440 bits (1131), Expect = e-128
 Identities = 259/594 (43%), Positives = 346/594 (58%), Gaps = 36/594 (6%)

Query: 1   MPYTAPLNDLRFLLDHVVGFDAVQATDRFAETTPDVTEAILTEAAKLCEGELAPLQRAGD 60
           M YTAPL D+ F ++H+   D V     F E   +  +A+L E AKL EG +APL   GD
Sbjct: 1   MSYTAPLKDMLFDIEHLARIDQVAQMPGFEEAGLETAQAVLEECAKLNEGVIAPLNFEGD 60

Query: 61  LHPARLENGVVRTSPGFAEGYRAIAAGGWVGMSADPAYGGMGLPMALATCMNEMMSSACL 120
            +P+  ++GVV T+PGF + ++  A GGW G+     +GG GLP  +     E+++SA +
Sbjct: 61  KNPSWFKDGVVTTTPGFKDAFKQYAEGGWQGLQHPVDFGGQGLPKTIGAACGEILNSANM 120

Query: 121 SLQIAPMMTQGQIEALEAHASDALKALYLPRLTSGDWVGTMNLTEPQAGSDVGALTTKAV 180
           S  + P++T G IEAL    SD LKA YL +L SG W GTMNLTEPQAGSD+ A+ ++A 
Sbjct: 121 SFALCPLLTDGAIEALLTAGSDELKATYLEKLVSGQWTGTMNLTEPQAGSDLAAVRSRAE 180

Query: 181 PKGDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAGN 240
           P+ DG+Y + G KI+I++G++D   N+ HLVLAR+     G KGISLF+VP+ + +  G+
Sbjct: 181 PQPDGSYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFMVNPDGS 240

Query: 241 PGVANALKVVSLEHKLGLHGSPTAVMQY---EGATGWLVGPEHGGMRAMFTMMNNARLGV 297
            G  N +  VS+EHK+G+  SPTAV+QY    GA G+LVG E+ G+  MF MMN AR  V
Sbjct: 241 LGARNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNAARYAV 300

Query: 298 GVQGIGVAEAAYQHALAHARDRKQGQT---PVADADSILAHADVRRMVMTMRAEVFAARA 354
           GVQGI +AE AYQ A+ +A+DR Q +     ++ A  I+ H DV+RM+MTMRA   A RA
Sbjct: 301 GVQGIAIAERAYQKAVGYAKDRVQSRPVDGSMSTAAPIIHHPDVKRMLMTMRASTEACRA 360

Query: 355 IALSTAVATD-MHHATGAESWAARAA---LLTPICKAYGTDTGIRVADLGLQVHGGMGVI 410
           +A   A A D  HH   AE     AA    L P+ K Y T+  + V  LG+QVHGGMG I
Sbjct: 361 MASVAAAAYDASHHHPDAEVRKQNAAFYEFLVPLVKGYSTEMSLEVTSLGVQVHGGMGFI 420

Query: 411 EETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLA-DGGEAMSRLLDEIE----ALAESA 465
           EETGAAQY RD ++  IYEGT  IQA DLVGRK A DGG     +  +IE     LA+  
Sbjct: 421 EETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGTGAKAIAAQIEKTEAELAKRG 480

Query: 466 RGSLPELAEPVWQACETLRETTEALVAETRL--NARFGGAQPYLMAAARVLGGHAHLAA- 522
                 + + +  A E   +  E + A TR   NA F G+ PYLM A  ++ G     A 
Sbjct: 481 SADAKAVHQRLKAAREAFVDAVEFIAANTRANPNAAFAGSVPYLMLAGNLVAGWQMARAL 540

Query: 523 -----AIAEGGRG----PRSALARFFVGRLLPE---------HGALAAQALAGD 558
                A+A+G        +   ARF+   +L            GA AA ALA D
Sbjct: 541 MVAEDALAQGTDAAFMQAKITTARFYADHILSRAPGVRDSIVDGAEAATALAID 594