Pairwise Alignments

Query, 571 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 593 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  441 bits (1133), Expect = e-128
 Identities = 251/545 (46%), Positives = 335/545 (61%), Gaps = 16/545 (2%)

Query: 3   YTAPLNDLRFLLDHVVGFDAVQATDRFAETTPDVTEAILTEAAKLCEGELAPLQRAGDLH 62
           Y APL D+ F +  V G DA+ A     ETT D+ EAIL EAA    G L PL R GD+ 
Sbjct: 4   YAAPLRDMLFTIREVGGLDAICAQPGHEETTLDLVEAILQEAAHYATGVLDPLNRTGDVQ 63

Query: 63  PARLENGVVRTSPGFAEGYRAIAAGGWVGMSADPAYGGMGLPMALATCMNEMMSSACLSL 122
            AR  +G V ++ GF E + +    GW GM A   +GG GLP  ++T + EM  S+ L+ 
Sbjct: 64  GARWHDGQVTSADGFREAWASFCGNGWNGMPAATKWGGQGLPTLVSTAVLEMWKSSNLAF 123

Query: 123 QIAPMMTQGQIEALEAHASDALKALYLPRLTSGDWVGTMNLTEPQAGSDVGALTTKAVPK 182
            +  M+T G +EA+  H SDALK  +L  + +G W GTMNLTEPQAGSD+ AL ++AVP+
Sbjct: 124 SLCQMLTLGAVEAIAHHGSDALKRRFLEPMVAGRWTGTMNLTEPQAGSDLAALRSRAVPE 183

Query: 183 GDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAGNPG 242
           GD  Y ++G KI+I+WG++D   N+ HLVLARLPD  PG KGISLFL P++L D  G+ G
Sbjct: 184 GD-HYRVSGNKIFITWGEHDMAENIVHLVLARLPDAPPGVKGISLFLCPKYLVDDDGSLG 242

Query: 243 VANALKVVSLEHKLGLHGSPTAVMQY---EGATGWLVGPEHGGMRAMFTMMNNARLGVGV 299
             N L   S+EHK+G+HGSPTA M +    GA G+LVG  + G+  MFTMMN+ARL VG+
Sbjct: 243 EHNDLACTSIEHKMGIHGSPTASMSFGDGGGAIGYLVGEPNQGLACMFTMMNHARLNVGL 302

Query: 300 QGIGVAEAAYQHALAHARDRKQGQTPVADADSILAHADVRRMVMTMRAEVFAARAIALST 359
           +G+G+AE AYQ A A+A +R QG+  ++ + +I  H DVRRM+M M+A   A RA+A   
Sbjct: 303 EGVGIAERAYQRARAYALERVQGKPLLSGSTTIAGHPDVRRMLMDMKARTEAMRALAYFC 362

Query: 360 AVATD--MHHATGAESWAARA--ALLTPICKAYGTDTGIRVADLGLQVHGGMGVIEETGA 415
           A   D    HA   E   A A   LL P+ K + TD+   +   G+QVHGGMG +EETGA
Sbjct: 363 AGQMDRAAGHADAQEREQALALVGLLIPVVKGWCTDSAQGITSDGVQVHGGMGYVEETGA 422

Query: 416 AQYLRDVRVTAIYEGTNGIQAMDLVGRKLA-DGGEAMSRLLDEIE----ALAESARGSLP 470
           +Q+LRD R+T IYEGT GIQA DL+GRKLA +GG  +  LL  I+     LAE    +L 
Sbjct: 423 SQHLRDARITTIYEGTTGIQANDLIGRKLAREGGRTLKALLGRIDRDARRLAEMPDAALA 482

Query: 471 ELAEPVWQACETLRETTEALVAETRLNAR-FGGAQPYLMAAARVLGGHAHLAAAIAEGGR 529
            +   +  +   L E  + L+A     A+   GA P+L  A  V+GG   L+A +AE   
Sbjct: 483 RIGSVLAASAHALEEAADWLLAHDDQPAQCAAGAVPFLRLAGTVIGG--WLSARMAEAAT 540

Query: 530 GPRSA 534
              +A
Sbjct: 541 AQLAA 545