Pairwise Alignments

Query, 571 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

 Score =  416 bits (1070), Expect = e-120
 Identities = 252/601 (41%), Positives = 333/601 (55%), Gaps = 44/601 (7%)

Query: 3   YTAPLNDLRFLLDHVVGFDAVQATDRFAETTPDVTEAILTEAAKLCEGELAPLQRAGDLH 62
           Y AP+ D  F+L+ V+G +       F + TPD+ EAI  EAAKL E  L PL  +GD  
Sbjct: 4   YKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSGDQQ 63

Query: 63  PA-RLENGVVRTSPGFAEGYRAIAAGGWVGMSADPAYGGMGLPMALATCMNEMMSSACLS 121
              R ++G V    GF   Y A   GGW+G++    +GG GLP  L   + E MSSA LS
Sbjct: 64  GCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSANLS 123

Query: 122 LQIAPMMTQGQIEALEAHASDALKALYLPRLTSGDWVGTMNLTEPQAGSDVGALTTKAVP 181
           L + P +TQG I A+  H +   K  YLP++  G W GTMNLTEP  G+D+G L TKAVP
Sbjct: 124 LMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTKAVP 183

Query: 182 KGDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAGNP 241
           +GDG+Y I+GQKI+IS G++  T N+ HLV+AR+     GTKGISLF+VP+ L    G  
Sbjct: 184 QGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKEDGTL 243

Query: 242 GVANALKVVSLEHKLGLHGSPTAVMQYEGATGWLVGPEHGGMRAMFTMMNNARLGVGVQG 301
           G  N +   ++EHK+G+HG+ T VM Y+ ATG+L+G E+ G+ AMF MMN ARLGVG+QG
Sbjct: 244 GERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVGLQG 303

Query: 302 IGVAEAAYQHALAHARDRKQGQT------PVADADSILAHADVRRMVMTMRAEVFAARAI 355
           + V E AYQ+A+ +ARDR QG++      P   AD I+ H D+RR +MT++A   A RA 
Sbjct: 304 LSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAGRAF 363

Query: 356 ALSTAVATDMHHATGAESWAARA----ALLTPICKAYGTDTGIRVADLGLQVHGGMGVIE 411
            L TA+ +D+ H    E     A     L+TPI K   TD G   A +  QV GG G IE
Sbjct: 364 LLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHGYIE 423

Query: 412 ETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLA-DGGEAMSRLLDEIEALAESARG--- 467
           E G +QY+RD R+T IYEG NGIQA+DLVGRKL  +GG A+  L  EI    E  R    
Sbjct: 424 EHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRADEK 483

Query: 468 ----------SLPEL-AEPVWQACETLRETTEALVAETRLNARFG----GAQPYLMAAAR 512
                      L +L A  +W     + +   A    T     FG    G    LMA A 
Sbjct: 484 LSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMAKA- 542

Query: 513 VLGGHAHLAAAIAEGGRGPRSAL------ARFFVGRLLPEHGALAAQALAGDKDLYALDP 566
                   + A+A G       L      A+F++ R++PE     A+   G   +  L  
Sbjct: 543 -------ASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAA 595

Query: 567 E 567
           E
Sbjct: 596 E 596