Pairwise Alignments

Query, 431 a.a., diaminopimelate decarboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 415 a.a., diaminopimelate decarboxylase from Pseudomonas putida KT2440

 Score =  378 bits (970), Expect = e-109
 Identities = 204/411 (49%), Positives = 270/411 (65%), Gaps = 5/411 (1%)

Query: 1   MDHFTYIKGQLHAEDVPVSAIADAVGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMK 60
           M+ F Y  G+L AE V +SAIA+  GTP YVYS A +   ++ + +AL    HLVCFA+K
Sbjct: 1   MNAFNYRDGELFAEGVALSAIAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVK 60

Query: 61  SNSNQAILKLLADLGAGMDVVSGGEYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIR 120
           +NSN  +L +LA LGAG D+VSGGE  R  AAG   DR+VFSGVGKT ++MR AL  G+ 
Sbjct: 61  ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH 120

Query: 121 QFNVESEPEMQRLSAVAQGLGMQAPITIRVNPDVDAKTHEKIATGKSENKFGIPISRARE 180
            FNVES  E++RL  VA  +G  AP+++RVNPDVDA TH  I+TG  ENKFGI I+ A  
Sbjct: 121 CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA 180

Query: 181 VYAQAARLPGIKVIGIDVHIGSQLTELEPFELAYAKVAELTRHLRADGHEITRLDLGGGL 240
           +Y +AA+LP ++V+G+D HIGSQLT +EPF  A  ++  L   L   G  +  LDLGGG+
Sbjct: 181 IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLVLVDRLAECGIHLRHLDLGGGV 240

Query: 241 GIPYARTNEAPPLPTDYGALIQRTVGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDR 300
           G+ Y   +E PP   DY   I+  VG+    +  EPGR I  NAG+L++ V Y+K  E +
Sbjct: 241 GVRY--RDEQPPRVADYIKAIRERVGERDLALVFEPGRYIVANAGVLLTRVEYLKHTEHK 298

Query: 301 QFLILDAAMNDLIRPSMYGAYHDIVPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVP 360
            F I+DAAMNDLIRP++Y A+  +  V+  A       YD+VGP+CE+GD   K R ++ 
Sbjct: 299 DFAIIDAAMNDLIRPALYQAWMGVSAVKPRA--GEGRAYDLVGPICETGDFLGKDR-VLN 355

Query: 361 LTEGDLVAFRSAGAYGAVMASEYNTRPLIPEVLVHGDQFAVIRQRPSFDEI 411
           L EGDL+A  SAGAYG VM+S YNTR    E+LV GDQ   +R+R +  E+
Sbjct: 356 LAEGDLLAVESAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETVAEL 406