Pairwise Alignments

Query, 431 a.a., diaminopimelate decarboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 429 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  343 bits (881), Expect = 5e-99
 Identities = 197/406 (48%), Positives = 253/406 (62%), Gaps = 9/406 (2%)

Query: 6   YIKGQLHAEDVPVSAIADAVGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMKSNSNQ 65
           Y   QL  E V ++A+A   GTP +VYS A + +    +   L+   HL+C+AMK+NS+ 
Sbjct: 18  YQDHQLMIEGVSLAALAQEHGTPLFVYSRAAMLQALAAYQRGLAGRRHLICYAMKANSSL 77

Query: 66  AILKLLADLGAGMDVVSGGEYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIRQFNVE 125
           AIL+ L   G G+D+VSGGE  RA A GV   +++FSGVGKT  EMR AL  GI  FNVE
Sbjct: 78  AILQALVAAGCGLDIVSGGELERALAVGVEPAKVIFSGVGKTRAEMRQALAVGIGCFNVE 137

Query: 126 SEPEMQRLSAVAQGLGMQAPITIRVNPDVDAKTHEKIATGKSENKFGIPISRAREVYAQA 185
           S  E+  L  VAQG+G++AP++IRVNP+VDA+TH  I+TG   NKFGI        Y  A
Sbjct: 138 SRAELDVLDEVAQGMGLRAPVSIRVNPNVDAQTHPYISTGLKGNKFGIAHEDVVSTYRHA 197

Query: 186 ARLPGIKVIGIDVHIGSQLTELEPFELAYAKVAELTRHLRADGHEITRLDLGGGLGIPYA 245
           A   G++V+GID HIGSQ+T+  P+  A  +V +L   +   G  I  +D GGGLGI Y 
Sbjct: 198 AACDGLRVVGIDCHIGSQITQTGPYLDAMDRVLDLVEQIEGAGVPIDHIDFGGGLGIDYQ 257

Query: 246 RTNEAPPLPTDYGALIQRT----VGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDRQ 301
             N  P     + AL+QR      GD    I IEPGR + GNAG+ ++EV+Y+K GE + 
Sbjct: 258 GDN-PPEADVLWQALLQRMDARGFGDR--RICIEPGRSLVGNAGVCLTEVLYLKPGEQKN 314

Query: 302 FLILDAAMNDLIRPSMYGAYHDIVPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVPL 361
           FLI+DAAMNDL RP+MY A+H IVPV   A    T  +D+VGPVCESGD   + R +  +
Sbjct: 315 FLIVDAAMNDLPRPAMYQAFHRIVPVAPRA-SAETLTWDVVGPVCESGDWIGRDRALA-V 372

Query: 362 TEGDLVAFRSAGAYGAVMASEYNTRPLIPEVLVHGDQFAVIRQRPS 407
             GDL+A  SAGAY   MAS YNTR    EVLV G Q  +IR R S
Sbjct: 373 QSGDLLAVLSAGAYCMSMASNYNTRGRAAEVLVDGAQAHLIRARES 418