Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 928 a.a., DNA polymerase I from Escherichia coli ECOR38

 Score =  761 bits (1965), Expect = 0.0
 Identities = 431/940 (45%), Positives = 593/940 (63%), Gaps = 36/940 (3%)

Query: 9   LHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAVIFDK 68
           L L+DGS++++RAYHA PPLT  S G P GA+ G  NML+  +        TH AV+FD 
Sbjct: 9   LILVDGSSYLYRAYHAFPPLTN-SAGEPTGAMYGVLNMLRSLIMQYKP---THAAVVFDA 64

Query: 69  GSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIATLACQ 128
              TFR++L++ YK++R  MP+DLR QI       +A  +    + G EADD+I TLA +
Sbjct: 65  KGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLARE 124

Query: 129 AREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVDVQALAG 188
           A +AG    I + DKD+ QLV   + +++ M N  +  + V  K+GV P+ ++D  AL G
Sbjct: 125 AEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMG 184

Query: 189 DSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEI-----KQPKRRQTLIEHRAQIE- 242
           DS DN+PG PG+G KTA  L+   G L+ L     +I     +  K     +E   ++  
Sbjct: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244

Query: 243 LSKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEAPAVPE 302
           LS +L  +  D+EL+ T E LEV+ P  E LLG   + EF+  T  +     ++A  V  
Sbjct: 245 LSYQLATIKTDVELELTCEQLEVQPPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGVKP 304

Query: 303 PAATTASPEAEEHPPLSAS-----EHVTIRDAETLQSWIDAIHARGVVAVDTETTGLNEM 357
            A    +  A+E P ++A+      +VTI D ETL+ WI  +    V A DTET  L+ +
Sbjct: 305 AARPQETSVADEAPEVTATVISYDNYVTILDEETLKEWIAKLEKAPVFAFDTETDSLDNI 364

Query: 358 RADLVGVSLCVDPGRAAYLPLAHKDGGGADDLFGGEAKLAEGQLDFETALGMLKPVLEDP 417
            A+LVG+S  ++PG AAY+P+AH      D            Q+  E AL +LKP+LED 
Sbjct: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPD------------QISRERALELLKPLLEDE 412

Query: 418 AVLKIGQNMKYDAKILARNGITVAPID-DTMLLSYALHAGLHGHGMDALSERYLDHTPIP 476
             LK+GQN+KYD  ILA  GI +  I  DTML SY L++    H MD+L+ER+L H  I 
Sbjct: 413 KALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTIT 472

Query: 477 IKTLLGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLKPRLHLAQ-VTRVYEWMERP 535
            + + G GK+ +TF+ + +EEA +YAAEDA++TL+L  ++ P L   +    V+E +E P
Sbjct: 473 FEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMP 532

Query: 536 MVPVLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFE 595
           +VPVL+ +E  G+K+D   L   S     ++A LE + HE+AGE FN+ S  QL  ILFE
Sbjct: 533 LVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFE 592

Query: 596 KMGFEGGKTGKSGKYSTPADVLEDLATEHDLPRRVLDWRQLSKLKSTYTDALQDHINPET 655
           K G +  K    G  ST  +VLE+LA ++ LP+ +L++R L+KLKSTYTD L   INP+T
Sbjct: 593 KQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKT 652

Query: 656 GRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLDYSQIELR 715
           GRVHTSY  A   TGRL+STDPNLQNIPVR+EEGRRIR+AF+A   +V+VS DYSQIELR
Sbjct: 653 GRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELR 712

Query: 716 ILAHIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVIYGISGFG 775
           I+AH++    L TAF +G DIH  TA+E+F +PL+ +T E RR AKAINFG+IYG+S FG
Sbjct: 713 IMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFG 772

Query: 776 LARNLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIHTPEI-GAK 834
           LAR L IPR EAQ ++D YFER+PG+  YM+ T A AKE  YV+TL GR+++ P+I  + 
Sbjct: 773 LARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSN 832

Query: 835 GPQAGFAKRAAINAPIQGTAADIIRRAMVRMPAAI-ADLP-ARMLLQVHDELIFEVEEDA 892
           G +   A+RAAINAP+QGTAADII+RAM+ + A + A+ P  RM++QVHDEL+FEV +D 
Sbjct: 833 GARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDD 892

Query: 893 VDRVIPAVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
           VD V   + Q+ME        LDVPL V+ G G +W +AH
Sbjct: 893 VDAVAKQIHQLMENC----TRLDVPLLVEVGSGENWDQAH 928