Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 944 a.a., DNA polymerase I from Dickeya dadantii 3937

 Score =  734 bits (1894), Expect = 0.0
 Identities = 417/947 (44%), Positives = 585/947 (61%), Gaps = 34/947 (3%)

Query: 9   LHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAVIFDK 68
           L L+DGS++++RAYHA PPLT  + G P GA+ G  NML+  ++       +HVAV+FD 
Sbjct: 9   LILVDGSSYLYRAYHAFPPLTNGA-GEPTGAMYGVLNMLRSLLQQY---HPSHVAVVFDA 64

Query: 69  GSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIATLACQ 128
              TFR+DL++ YK++R  MP+DLR QI       +A  +    + G EADD+I TLA Q
Sbjct: 65  KGKTFRDDLFEHYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLSVSGVEADDVIGTLAQQ 124

Query: 129 AREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVDVQALAG 188
           A  AG    I + DKD+ QLV   + +++ M N  +  D V  K+G+ P  ++D  AL G
Sbjct: 125 AERAGKPVLISTGDKDMAQLVTPNITLINTMNNTILGPDEVCAKYGIPPSLIIDFLALMG 184

Query: 189 DSVDNVPGAPGIGIKTAALLINEYGSLEEL---LDRAGEI--KQPKRRQTLIEHRAQIE- 242
           DS DN+PG PG+G KTA  L+   G L+ L   LD+   +  +  K     +E   ++  
Sbjct: 185 DSSDNIPGVPGVGEKTAQALLQGLGGLDTLYADLDKIASLTFRGAKTMAAKLEQNKELAY 244

Query: 243 LSKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEA----- 297
           LS +L  +  D+EL+   E L V +P+   L       EF+     +     ++      
Sbjct: 245 LSYQLATIKTDVELELGCEQLTVNEPDVAELHELFTRYEFKRWLADVEDGKWLQGGRKSQ 304

Query: 298 PAVPEPAATTASPEAEEHPPLSASEHVTIRDAETLQSWIDAIHARGVVAVDTETTGLNEM 357
           PAVP   AT  +   E    LS   +VTI D + L  W++ I    + + DTET GL+ +
Sbjct: 305 PAVPFVKATVEATPKEAASVLSQDGYVTILDEKVLLDWLERIKTAALFSFDTETDGLDTL 364

Query: 358 RADLVGVSLCVDPGRAAYLPLAHKDGGG-ADDLFGGEAKLA---EGQLDFETALGMLKPV 413
            A+LVGVSL + PG AAYLPL H      + +++      A     QLD +  L +LKP+
Sbjct: 365 TANLVGVSLAIKPGEAAYLPLGHITSRVYSSNIYSSTVSPATRMSTQLDRDRVLALLKPL 424

Query: 414 LEDPAVLKIGQNMKYDAKILARNGITVAPID-DTMLLSYALHAGLHGHGMDALSERYLDH 472
           LED  + KIGQN+K+D  ++AR GI +  I  DTML SY L +    H MD+LSERYL H
Sbjct: 425 LEDDGIRKIGQNLKFDKGVMARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSLSERYLQH 484

Query: 473 TPIPIKTLLGTGKSAITFDFVPIEEATKYAAEDAEITLRL----WQRLKPRLHLAQVTRV 528
             I  + + G GK+ +TFD +P+ +A+ YAAEDA++TLRL    W +L+P+  L    +V
Sbjct: 485 KTITFEEIAGKGKNQLTFDQIPLAQASVYAAEDADVTLRLHETLWAKLEPQQELR---KV 541

Query: 529 YEWMERPMVPVLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQ 588
           ++ ++ P+VPVL+ +E  G+ +D   L+  S    Q++A LE + HELAGE+FN+ SP Q
Sbjct: 542 FQNIDMPLVPVLSRIERTGVLIDTTILAEHSRELTQRLAELEVQAHELAGEAFNLSSPKQ 601

Query: 589 LGEILFEKMGFEGGKTGKSGKYSTPADVLEDLATEHDLPRRVLDWRQLSKLKSTYTDALQ 648
           LG IL+EK+     K    G  ST  +VL +LA ++ LP+ +L+ R L+KLKSTYTD L 
Sbjct: 602 LGAILYEKLQLPVIKKTPKGAPSTNEEVLAELALDYPLPKLILEHRGLAKLKSTYTDKLP 661

Query: 649 DHINPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLD 708
             INP T RVHTSY  A   TGRL+S+DPNLQNIPVR+EEGRRIR+AF+A  G+ +++ D
Sbjct: 662 QMINPLTRRVHTSYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRILAAD 721

Query: 709 YSQIELRILAHIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVI 768
           YSQIELRI+AH++    L  AF  GLDIH  TA+E+F +PLD +T E RR AKAINFG+I
Sbjct: 722 YSQIELRIMAHLSRDAGLLRAFSHGLDIHRATAAEVFGLPLDRVTTEQRRSAKAINFGLI 781

Query: 769 YGISGFGLARNLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIHT 828
           YG+S FGL+R L IPR+EAQ +++ YFER+PG++ YM+ T   A +  YV TL GR+++ 
Sbjct: 782 YGMSAFGLSRQLAIPRSEAQKYMNLYFERYPGVQEYMERTRQQAVDQGYVSTLDGRRLYL 841

Query: 829 PEIGAKGPQA-GFAKRAAINAPIQGTAADIIRRAMVRMPAAIADLP--ARMLLQVHDELI 885
           P+I ++   +   A+RAAINAP+QGTAADII++AM+ + A +        ML+QVHDEL+
Sbjct: 842 PDIHSRNVNSRKAAERAAINAPMQGTAADIIKKAMIAIDAWLRQEKPLVTMLMQVHDELV 901

Query: 886 FEVEEDAVDRVIPAVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
           FEV    +D     +R +MEG     + LDVPL VD G G +W +AH
Sbjct: 902 FEVHHSVLDEASAKIRNLMEGC----MQLDVPLQVDIGTGSNWDQAH 944