Pairwise Alignments

Query, 600 a.a., succinate dehydrogenase, flavoprotein subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 590 a.a., succinate dehydrogenase flavoprotein subunit from Pseudomonas putida KT2440

 Score =  605 bits (1561), Expect = e-177
 Identities = 299/561 (53%), Positives = 388/561 (69%), Gaps = 1/561 (0%)

Query: 8   THNYDVVVVGAGGAGLRATLGMAEQGLRTACISKVFPTRSHTVAAQGGIAASLSNMGP-D 66
           T ++D +++G GGAG+RA L +A+ G +TA ++KVFPTRSHTV+AQGGI  ++++  P D
Sbjct: 6   TISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPND 65

Query: 67  HWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQRPFGGHT 126
            W+WHMYDTVKGSD++GD DA+EY+ +E P AV+EL+H G+PFSRTE G+IYQRPFGG +
Sbjct: 66  DWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRPFGGQS 125

Query: 127 TEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKNNAEFFIEYFAIDLIMSEDGQCQGVVC 186
            +FG+G    RTCAA+DRTGHA+LHTLY  +LK    F  EY+A+DL+ ++DG   GV+ 
Sbjct: 126 KDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAFVGVIA 185

Query: 187 WKLDDGTIHVFNAKMTVLATGGYGRAYFSATSAHTCTGDGGGMVARQGLPLQDMEFVQFH 246
             ++ G      +K TVLATGG GR Y S T+A   TGDG GM  R G+P+QD+E  QFH
Sbjct: 186 ICIETGETLYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIEMWQFH 245

Query: 247 PTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTMEIREGRG 306
           PTGI GAG L+TEG RGEGGYL N+ GERFMERYAP  KDLA RDVV+R M  EI  G G
Sbjct: 246 PTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEIIAGNG 305

Query: 307 VGPDGDHIHLHLNHLPPETLALRLPGISESARIFAGVDVNKEPIPVLPTVHYNMGGIPTN 366
           VGP+ DH+ L L+HL  E L  RLPGI E ++ FA VD    P+PV+PT HY MGG+ TN
Sbjct: 306 VGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMGGVATN 365

Query: 367 YWGEVLNPTAEDPDRIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAIKAGQVV 426
             G+ +   A+  D I PGL AVGE  C SVHGANRLG NSL+DLVVFGRAA +   + +
Sbjct: 366 IHGQAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKAL 425

Query: 427 DPTVSNPTLNQASIDAALARFDGLRHAKGNVSTAELRLEMQKTMQADAAVFRTDKTLAEG 486
              V     +   +D AL R + L         A L+ E+Q  MQ    VFRT + + +G
Sbjct: 426 SEGVEYRDASDTDVDVALNRLNKLNERTSGEDVASLKRELQSCMQNYFGVFRTGEYMQKG 485

Query: 487 VQKMYGVAGKVDDIKVTDRSLVWNSDLMETLELTNLMPNALATIVSAEARKESRGAHAHE 546
           ++++ G+  ++ ++K+ D+S  +N+  +E LEL NL+  A AT ++AEARKESRGAHA E
Sbjct: 486 IEQLAGLRDRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEARKESRGAHARE 545

Query: 547 DYADRDDENWRKHTLAYVNGK 567
           D+ DRDDENW  HTL Y   K
Sbjct: 546 DFEDRDDENWLCHTLYYPGEK 566