Pairwise Alignments

Query, 212 a.a., N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 207 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 4/115 (3%)

Query: 28  QVSAHYVIGRDGAVMRLVPEHLRAWHAGAGAWGGCTDVNSASIGIELDNDGTSPFSAPLM 87
           +VS+H+ + RDG V++ V    RAWHAGA  W G  + N  SIGIEL+      F A   
Sbjct: 83  EVSSHFFVRRDGEVVQFVDADARAWHAGASCWRGRHNCNDDSIGIELEGLEGERFEAAQY 142

Query: 88  DALEGLLGDILTRHGIPRKGVIGHSDLAPGRKIDPGPRFDWRRLARRGLSIWPEG 142
            AL  L   ++ R+  P + + GH  +APGRK DPGP FDW RL  +    WPEG
Sbjct: 143 TALARLCTQLVRRY--PVRHIAGHEHIAPGRKQDPGPGFDWSRL--QADLQWPEG 193