Pairwise Alignments

Query, 246 a.a., protein of unknown function DUF28 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 242 a.a., YebC/PmpR family DNA-binding transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score =  228 bits (582), Expect = 6e-65
 Identities = 125/243 (51%), Positives = 163/243 (67%), Gaps = 3/243 (1%)

Query: 1   MAGHSKWANIQHRKGRQDKLRAKLFSKLSKEITVAAKMGDPDPDKNPRLRLAVKEAKSQS 60
           MAGHSKWANI+H+K   D  + K++++L KEI VAA+MG  + D NPRLRLAV +A   +
Sbjct: 1   MAGHSKWANIKHKKAAADAKKGKVWTRLIKEIQVAARMGGGEIDSNPRLRLAVDKAYDAN 60

Query: 61  VPKDVIERAIKKSLGG-EGENYDEIRYEGYGPGGVAVIVEAMTDNRNRTASTVRSTFSKN 119
           +PKD I RAI++ +GG +G NY+EIRYEGYG GG AVIV+ MTDNR RT + VR  FSK 
Sbjct: 61  MPKDNINRAIQRGVGGVDGANYEEIRYEGYGIGGAAVIVDTMTDNRTRTVAEVRHAFSKF 120

Query: 120 GGNLGETGSVSFMFERKGQVSYPAEAGDADTVMMAAIEAGAEDVESDESGHI-IWCADTD 178
           GGN+G  GSVSFMF+  GQ  + A     D +M AA+EAGA+DV ++E G I + C   D
Sbjct: 121 GGNMGTDGSVSFMFDHVGQFLF-APGTPEDKLMEAALEAGADDVVTNEDGSIEVICPPND 179

Query: 179 LNEVSTALEAELGESESTKLVWRPTTTTELDLEGMQKLMKLLDALEDDDDVQNVTANFEA 238
             +V  ALEA   ++E  ++  +P T  E   +   K+ KLLDALE+ DDVQ V  N   
Sbjct: 180 FPKVKAALEAASFKAELAEVTMKPQTEVEFTGDDAVKMQKLLDALENLDDVQEVYTNAAI 239

Query: 239 SDE 241
           +DE
Sbjct: 240 ADE 242