Pairwise Alignments

Query, 246 a.a., protein of unknown function DUF28 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 247 a.a., YebC/PmpR family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  229 bits (585), Expect = 3e-65
 Identities = 123/248 (49%), Positives = 168/248 (67%), Gaps = 3/248 (1%)

Query: 1   MAGHSKWANIQHRKGRQDKLRAKLFSKLSKEITVAAKMGDPDPDKNPRLRLAVKEAKSQS 60
           MAGHSKWAN +HRK  QD  R K+F+K+ +E+  AAK+G  DP  NPRLR A+ +A S +
Sbjct: 1   MAGHSKWANTKHRKAAQDSKRGKIFTKIIRELVTAAKLGGGDPGANPRLRAAIDKALSNN 60

Query: 61  VPKDVIERAIKKSLGGEGE-NYDEIRYEGYGPGGVAVIVEAMTDNRNRTASTVRSTFSKN 119
           + +D + RAI + +GG+ + N + I YEGYGPGG AV++E ++DNRNRT + VR  F+K 
Sbjct: 61  MTRDTLNRAIARGVGGDDDTNMETIIYEGYGPGGTAVMIECLSDNRNRTVAEVRHAFTKC 120

Query: 120 GGNLGETGSVSFMFERKGQVSYPAEAGDADTVMMAAIEAGAEDVESDESGHI-IWCADTD 178
           GGNLG  GSV+++F +KG ++Y A   D D VM AA+EAGAED+ S + G I ++ A  +
Sbjct: 121 GGNLGTDGSVAYLFTKKGVITY-APGLDEDVVMEAALEAGAEDIVSYDDGVIDVFTAWEN 179

Query: 179 LNEVSTALEAELGESESTKLVWRPTTTTELDLEGMQKLMKLLDALEDDDDVQNVTANFEA 238
           L EV  AL A    +ES ++   P+T  ++D E   KL++L+D LED DDVQ V  N E 
Sbjct: 180 LGEVKDALTAAGFTAESAEVSMIPSTKADMDEETAPKLLRLIDMLEDCDDVQEVYHNGEI 239

Query: 239 SDEVMAQL 246
           SDEV A L
Sbjct: 240 SDEVAATL 247