Pairwise Alignments

Query, 246 a.a., protein of unknown function DUF28 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 247 a.a., DNA-binding regulatory protein, YebC/PmpR family from Kangiella aquimarina DSM 16071

 Score =  220 bits (560), Expect = 2e-62
 Identities = 114/243 (46%), Positives = 161/243 (66%), Gaps = 3/243 (1%)

Query: 1   MAGHSKWANIQHRKGRQDKLRAKLFSKLSKEITVAAKMGDPDPDKNPRLRLAVKEAKSQS 60
           MAGHSKWANI+HRK  QD  R K+F+K+ +E+ VAAK G  DP+ NPRLR A+ +A   +
Sbjct: 1   MAGHSKWANIKHRKAAQDAKRGKIFTKIIRELVVAAKEGGGDPNDNPRLRAAMDKALGAN 60

Query: 61  VPKDVIERAIKKSLGG-EGENYDEIRYEGYGPGGVAVIVEAMTDNRNRTASTVRSTFSKN 119
           + KD IE+AI +  G  EG+NY+E+ YEGYGPGGVA++VE MTDN+NRT   VR  F+K+
Sbjct: 61  MKKDTIEKAIDRGTGNAEGDNYEELTYEGYGPGGVAILVECMTDNKNRTVGEVRHAFTKH 120

Query: 120 GGNLGETGSVSFMFERKGQVSYPAEAGDADTVMMAAIEAGAED-VESDESGHIIWCADTD 178
           GGNLG  GSV+++FE+KGQ  +  +  + + +M AA+EAGAED +  D+    I     D
Sbjct: 121 GGNLGTNGSVAYLFEKKGQFVF-GDNVEEEALMEAALEAGAEDFIAHDDGSFEILTTPED 179

Query: 179 LNEVSTALEAELGESESTKLVWRPTTTTELDLEGMQKLMKLLDALEDDDDVQNVTANFEA 238
             ++  AL     E E+ ++   P+T  EL ++   K+++L+D LE+ DD QNV  N + 
Sbjct: 180 FMDIKEALVKAGFEPENAEVSMLPSTQAELTVDDGAKVIRLVDRLEELDDTQNVYTNADI 239

Query: 239 SDE 241
             E
Sbjct: 240 PSE 242