Pairwise Alignments

Query, 330 a.a., Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 324 a.a., threo-3-hydroxy-L-aspartate ammonia-lyase from Pectobacterium carotovorum WPP14

 Score =  197 bits (500), Expect = 4e-55
 Identities = 116/320 (36%), Positives = 172/320 (53%), Gaps = 5/320 (1%)

Query: 5   PDFDRIKAAEARLDGHVRRTPILSAPALDALAGRRVLVKAECLQHTGSFKARGGWAAVSA 64
           P +D + AA  R+DG+  +TP++++  ++   G     K E LQ  G+FK RG   A+  
Sbjct: 7   PTYDDVVAAAERIDGYANKTPVMTSRTVNNAFGAEFFFKCENLQRMGAFKFRGAMNALLQ 66

Query: 65  LPAAVRARGVIACSSGNHAQGVARAAAAHGTRALIVMPGDAPAPKVENTRALGAEVVFYD 124
                +A GV+  SSGNHAQ +A AA   G  A IVMP DAPA KV  TR  G  VV Y+
Sbjct: 67  FSDEQKAAGVVTFSSGNHAQAIALAAKLLGIPATIVMPHDAPAAKVAATRGYGGNVVEYN 126

Query: 125 RAREDRDGLTATLAERDGLTLIKPYDDTEVIAGQATTGLEIAAQAAAEGVHAAEVLVCCG 184
           R  EDR+ +   LA++ GLTLI PYD   VIAGQ T   E+  +          + VC G
Sbjct: 127 RYTEDREQIGNDLAKKYGLTLIPPYDHPHVIAGQGTAAKELLEETG----ELDALFVCLG 182

Query: 185 GGGLSAGIALALAETAPRMRVRPVEPDGFDDMARSLAAGTRLANSARDGSICDAILTPMP 244
           GGGL +G ALA  + +P+ ++  VEP   +D  +S  +G  + +     +I D   T   
Sbjct: 183 GGGLLSGCALATRQLSPQCKIYGVEPLAGNDGQQSFRSG-NIVHIDTPKTIADGAQTQHL 241

Query: 245 GEITFPVLASRAGPGLVVTEGEVLRTMKLAFQHLKLVLEPGGAVALAAALFRPDALSGDA 304
           G  TFP++       L VT+ +++  M+   + +K+V+EP G ++ AAA    ++L G  
Sbjct: 242 GNYTFPLIRQNVDDILTVTDDDLIDAMRFYTERMKIVVEPTGCLSFAAARNLKESLRGKR 301

Query: 305 VIAVATGGNVSAEVFARALS 324
           +  + +GGNV    +   L+
Sbjct: 302 IGIIISGGNVDISRYGAFLT 321