Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

 Score =  353 bits (906), Expect = e-102
 Identities = 234/557 (42%), Positives = 312/557 (56%), Gaps = 42/557 (7%)

Query: 1   MKDFAALFTSLDQTTKITPKVAALAAYFRTAPEEDRLWTIALLSGRRPKRTVTTTRLREW 60
           M  FAAL   +        K+  +A YFR+ P+ +R   +A L+G           +R  
Sbjct: 1   MNRFAALLDRMSYEAGRNAKIRLMADYFRSTPDPERGLALAALTGALSFANAKPGLVRTL 60

Query: 61  AAERAGIPLWLFEEAYPVVGDLAETIALVLPPPTRTSTRS--LTDWITTIRGLAARDEPD 118
            AERA  P+ LFE +Y  VGDL+ET+AL+ P P      +  L++ +  +   +    P 
Sbjct: 61  IAERAD-PV-LFEMSYDYVGDLSETVALMWPRPEGAQPHAPLLSEIVHGLSTFSKVSLPR 118

Query: 119 RRAEILAAWDSLPETERFVFNKLITGGFRMGVSAKLMTRALSQATDIPEPELAHRLMGDW 178
             A+ L   D L ET R+   KLITG  R+G SA+L   A++    +   E+     G  
Sbjct: 119 HLADWL---DGLDETGRWALLKLITGSMRVGASARLAKTAVASLGAVTPDEVGLVWPGLE 175

Query: 179 TPETTSFQSLVLTRDPAADLSKPYPF---YLAYGLEDPPDTLGPPADWQAEHKWDGIRGQ 235
            P    F + V  R P  + S P PF    LA+ +E+   T   PA + AE KWDGIR Q
Sbjct: 176 PPYEELF-AWVEGRGPRPETSNPAPFRPVMLAHAIEEADFTTLDPAAFSAEWKWDGIRVQ 234

Query: 236 LILRGGQHFV-----WSRGEELMTDRFPELAALRDFLPDGTVLDGELLAWDYNGAGDAPL 290
            +   G   V     +SR  E ++D FP++A    F  DG  +DGELL        D  +
Sbjct: 235 AVAGTGPDGVRVVRLYSRTGEDISDAFPDMAEAITF--DGA-MDGELLI-----VRDGRV 286

Query: 291 -PFNALQKRIGRKTVPKKLLSEAPVILRAYDLLEDGGTDLRDRPLSERRARLEALAAALP 349
            PFN LQ+R+ RKTV  K+L+E P  +RAYDLL DG  DLR++P + RRARLEAL A L 
Sbjct: 287 EPFNVLQQRLNRKTVTVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARRARLEALVARL- 345

Query: 350 DTLPLRLSPTLTFDSWDALAQIRAKSREMGA-------EGIMLKRRASPYLAGRKKGDWW 402
            T  + LSP + F +W+ L   R      GA       EG+M+KR  SPYL GR KG WW
Sbjct: 346 QTPRIDLSPMVPFSTWEDLTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGRPKGPWW 405

Query: 403 KWKVDPLTIDAVMIYAQAGHGRRANLFTDYTFAVWDGNE-----LVPFTKAYSGLTDAEF 457
           KWK DP T+DAV++YAQ GHG+R++ ++DYTF VW  +E     LVP  KAY G TD E 
Sbjct: 406 KWKRDPHTVDAVLMYAQRGHGKRSSFYSDYTFGVWTQSEEGEDVLVPVGKAYFGFTDEEL 465

Query: 458 RQITAWVRKNTLERFGPVRRVTPEH----VFEIAFEGIQASPRHKSGVALRFPRMLRWRK 513
           +QI A+VR+ T+ RFGPVR V  E     V E+AFEG+  S RH+SG+A+RFPR+ R R 
Sbjct: 466 KQIDAFVRRATINRFGPVREVVHEKDEGLVLEVAFEGLARSTRHRSGIAMRFPRIARLRW 525

Query: 514 DKPLQEANTLEDLKGML 530
           DKP  EA+ LE L+ +L
Sbjct: 526 DKPPGEADRLETLEALL 542