Pairwise Alignments

Query, 534 a.a., ATP dependent DNA ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 532 a.a., ATP-dependent DNA ligase (EC 6.5.1.1) LigC from Sphingobium sp. HT1-2

 Score =  357 bits (915), Expect = e-103
 Identities = 232/547 (42%), Positives = 314/547 (57%), Gaps = 33/547 (6%)

Query: 1   MKDFAALFTSLDQTTKITPKVAALAAYFRTAPEEDRLWTIALLSGRRPKRTVTTTRLREW 60
           M+ F+ L   L  T     K+A +AAY R AP+ DR W +A L+G    + V  + + E 
Sbjct: 1   MRAFSQLLDGLVYTRSRNGKLALIAAYMREAPDPDRGWALAALTGNLDLKAVKASAIGEM 60

Query: 61  AAERAGIPLWLFEEAYPVVGDLAETIALVLPPP------TRTSTRSLTDWITTIRGLAAR 114
              R   P+ LFE +   VGDLAET+AL+ P P          + SL+  I  +  ++  
Sbjct: 61  IRARTD-PV-LFEMSRDYVGDLAETVALLWPRPHDEPAELDDGSLSLSAIIDRLHNVSRA 118

Query: 115 DEPDRRAEILAAWDSLPETERFVFNKLITGGFRMGVSAKLMTRALSQA--TDIPEPELA- 171
             PD  A+++   D L  + RF   KL TGG R+G+SA+L     +QA   D+ + E   
Sbjct: 119 AAPDALAQMM---DHLDASGRFALLKLATGGLRVGISARLAKTGSAQAFGLDVDDVEQVW 175

Query: 172 HRLMGDWTPETTSFQSLVLTRDPAADLSKPY--PFYLAYGLEDPPDTLGPPADWQAEHKW 229
           H L   +       +      DP      PY  PF LA+ LE     L   AD+ AE KW
Sbjct: 176 HALAPPYAALFDWAEGRSGRPDPEGT---PYFRPFMLAHPLEADSVDL---ADYAAEWKW 229

Query: 230 DGIRGQLILRGGQHFVWSRGEELMTDRFPELAALRDFLPDGTVLDGELLA-WDYNGA--- 285
           DGIR Q++  G +  ++SR  + +T  FPE+A          VLDGELL   ++ GA   
Sbjct: 230 DGIRIQIVGTGRETRLYSRAGDDITGSFPEIAQA---FTGHAVLDGELLVKGEFQGAKEH 286

Query: 286 GDAPLPFNALQKRIGRKTVPKKLLSEAPVILRAYDLLEDGGTDLRDRPLSERRARLEALA 345
           G A   FNALQ+R+GRK V  K++++ P  +R YDLL +G  DLR  P ++RRARLEA  
Sbjct: 287 GGAAASFNALQQRLGRKAVSAKMMADYPAFVRLYDLLIEGDDDLRALPWTQRRARLEAYM 346

Query: 346 AAL-PDTLPLRLSPTLTFDSWDALAQIRAKSREMGAEGIMLKRRASPYLAGRKKGDWWKW 404
           A L PD   L  S  +    + ALA IRA +R+   EG+MLKRR SPY+AGRK   W+KW
Sbjct: 347 AQLSPDRFDL--SAVIDAPDFAALADIRAGARDAAIEGVMLKRRDSPYVAGRKAALWYKW 404

Query: 405 KVDPLTIDAVMIYAQAGHGRRANLFTDYTFAVW-DGNELVPFTKAYSGLTDAEFRQITAW 463
           K DPLT D VM+YAQ GHG+R++ ++DYTF  W +  EL+P  KAYSG TD E + +  +
Sbjct: 405 KRDPLTADCVMMYAQRGHGKRSSFYSDYTFGCWTEDGELLPVGKAYSGFTDEELKWLDRF 464

Query: 464 VRKNTLERFGPVRRVTPEHVFEIAFEGIQASPRHKSGVALRFPRMLRWRKDKPLQEANTL 523
           VR NT+ RFGPVR V    V E+AF+ I  S RHKSG+A+RFPR+ R R+DKP  EA+T+
Sbjct: 465 VRGNTVNRFGPVREVEKTLVLEVAFDSIHDSKRHKSGLAMRFPRIARIRRDKPAAEADTV 524

Query: 524 EDLKGML 530
           E LK ++
Sbjct: 525 EGLKRLV 531