Pairwise Alignments

Query, 231 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 281 a.a., IS3 family transposase from Magnetospirillum magneticum AMB-1

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 10/199 (5%)

Query: 19  LAVDRSSVRYRSVRPDDA--EARAAMKAVAAERRRFGYRRIHVMLERQGIMMNLKKLRRL 76
           L++ RSS  Y  +   +A  E    +     E   +G R++   L+ +G  +N+K++RRL
Sbjct: 18  LSIARSSFYYEPLGETEANLELMRLIDRQFLETPFYGVRQMAWHLQNEGHPVNVKRVRRL 77

Query: 77  YREEKLQ--VRRRGGRKRALGTR-WPMLVP----DAPNQHWSLDFVSDALTDGRQFRVLA 129
            R   L    ++    K A G + +P L+     D PNQ W  D     +  G  + ++A
Sbjct: 78  MRLMGLMPIYQKPNTSKPAKGHKTYPYLLRGLRIDRPNQVWCADITYLPMRRGFLY-LIA 136

Query: 130 VVDDYSRECLALVADTSLSGLRVVRELDALMLRRGQPAMVVSDNGTELTSVAVLSWCQRT 189
           ++D  +R+ LA     +L     V  L+  +LR G P ++ +D G++ TS A +   +R 
Sbjct: 137 IMDWATRKVLAWRISNTLEADFCVEVLNEAILRFGPPEIMNTDQGSQFTSFAWIDRLKRA 196

Query: 190 GIEWHYIAPGKPMQNGFVE 208
           G        G+ + N F+E
Sbjct: 197 GTRISMDGKGRCIDNVFIE 215