Pairwise Alignments

Query, 493 a.a., UDP-N-acetylmuramyl-tripeptide synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 495 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-di aminopimelate ligase from Escherichia coli ECRC98

 Score =  268 bits (685), Expect = 3e-76
 Identities = 186/484 (38%), Positives = 252/484 (52%), Gaps = 18/484 (3%)

Query: 20  RPVTGLALDSRQVKEGYLFAGLPGSRVHGAEFIQYALRMGAGAILTDAEGARIARDVLDG 79
           R +  + LDSR    G LF  + G +  G  +I  A+  G  AI+ +A+G     ++ + 
Sbjct: 20  RALREMTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKGEATDGEIREM 79

Query: 80  AEVTLIVAEDPRQAFSAAAALWYG--AQPATMVGVTGTNGKTSVASFTRQLWQGLGHAAA 137
             V +I      +  SA A  +Y   +    +VGVTGTNGKT+      Q  Q LG  +A
Sbjct: 80  HGVPVIYLSQLNERLSALAGRFYHEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSA 139

Query: 138 NIGTTGIEGDFSADLA--HTTPDPLTLHAALAEMAAQGITHAAMEASSHGLDQRRLDGVR 195
            +GT G  G     +   +TT   + +   LA +  Q  T  AME SSHGL Q R+  ++
Sbjct: 140 VMGTVG-NGLLGKVIPTENTTGSAVDVQHELAGLVDQDATFCAMEVSSHGLVQHRVAALK 198

Query: 196 LVAAGFTNFSQDHLDYHETFEAYFAAKAGLFSRVLADQGMAVINLDDPKGADMMAIAHGA 255
             A+ FTN S+DHLDYH   E Y AAK  L+S      G A+IN DD  G   +A    A
Sbjct: 199 FAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSEHHC--GQAIINADDEVGRRWLAKLPDA 256

Query: 256 GAELLTVGTHKDA---MLRLTAQRFDADGQEMRFTWKGVAHQARLNLVGGFQASNVLVAM 312
            A  +    + +     L+ T   +   G  +RF+      +   +L+G F  SN+L+A+
Sbjct: 257 VAVSMEDHINPNCHGRWLKATEVNYHDSGATIRFSSSWGDGEIESHLMGAFNVSNLLLAL 316

Query: 313 GLVMATGAQVGDLVPLLPRLATVRGRMQKVARRENGATVFVDYAHTPDALKTALRALRPH 372
             ++A G  + DL+    RL  V GRM+ V       TV VDYAHTPDAL+ AL+A R H
Sbjct: 317 ATLLALGYPLADLLKTAARLQPVCGRME-VFTAPGKPTVVVDYAHTPDALEKALQAARLH 375

Query: 373 VLGRLVVVFGAGGDRDSGKRPLMGAAAAAAADVVFVTDDNPRSEDPALIRAQVRAGCPEA 432
             G+L  VFG GGDRD GKRPLMGA A   ADV  VTDDNPR+E+P  I   + AG  +A
Sbjct: 376 CAGKLWCVFGCGGDRDKGKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDA 435

Query: 433 TD---VPDRAEAILRGVDALEPGDVLLIAGKGHETGQTVGDVVYPFDDAEQASVAVAALE 489
                + DRAEA+   V   +  DV+L+AGKGHE  Q VG+    + D     V VA L 
Sbjct: 436 GHAKVMEDRAEAVTCAVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSD----RVTVARLL 491

Query: 490 GRLA 493
           G +A
Sbjct: 492 GVIA 495