Pairwise Alignments

Query, 327 a.a., Monosaccharide-transporting ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  178 bits (451), Expect = 2e-49
 Identities = 105/312 (33%), Positives = 170/312 (54%), Gaps = 4/312 (1%)

Query: 2   LKRLIASRETLLIAAILLLLALIASRFPAFIAPSNLAHVFNDTSPLILLAIGQMIVILTR 61
           L RL+ S        ++++  ++      F+  SNL+++    S   ++A+G   VILT 
Sbjct: 23  LARLVRSPAFYPFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTG 82

Query: 62  CIDLSVAANLALTGMVVSMVNVAAPGLPIVVILAIAIGLGTLLGMFNGLLVWKLQIPPIV 121
            IDLSV   +AL+G + + + VA  GLP  + +   + +G   G+ NGL V  L +PPI+
Sbjct: 83  GIDLSVGPVMALSGTLTAGLMVA--GLPPGLAIGAGMLIGVAFGIGNGLFVAYLHMPPII 140

Query: 122 VTLGTMTIFRGIIFLISDGKWVNSHEMSPAFKAFPRAELLGLPVLSWIAILAVILFTIVM 181
           VTL TM I RG+  + +DG  ++   +   F  F R  L G+ V   I +L  ++  +++
Sbjct: 141 VTLATMGIARGLGLMYTDGYPISG--LPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLL 198

Query: 182 TRTTLGRAFYAAGGNPHAATYAGIDVGKTQFWAFTISGALAGLTGYLWVSRFAVSYVDIA 241
             T +GR  YA GGN  A   +G+   + +   + ISG  A + G +  SR      +  
Sbjct: 199 QHTRIGRYIYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAG 258

Query: 242 GGFELDVVAACVIGGVSIMGGVGTVGGALLGALFLGIIKNALPVVDISPFWQLAISGGAI 301
             FELD +AA V+GG SI GG G + G LLGA+ LG++ N L ++ +SP+ Q  I GG I
Sbjct: 259 VSFELDAIAAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGII 318

Query: 302 IIAVALNAQANR 313
           ++A+ ++ Q ++
Sbjct: 319 LLAIFISRQRHK 330