Pairwise Alignments

Query, 328 a.a., Monosaccharide-transporting ATPase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 327 a.a., Ribose transport system permease protein rbsC from Escherichia coli BL21

 Score =  202 bits (514), Expect = 9e-57
 Identities = 105/298 (35%), Positives = 176/298 (59%), Gaps = 5/298 (1%)

Query: 26  LLLLVAIGIFVANSFASPYFLNAWNLSDATFNFTEKAMIAFAMALLIISGEIDLSVASII 85
           L  L+ + +F   SF+SP+F N  N+       +   ++A  +  +II+  IDLS+ S++
Sbjct: 28  LFSLIILVLFF--SFSSPFFFNTENIMTIALQTSVIGIMAIGVTFVIITAGIDLSLGSVV 85

Query: 86  ALASTAMGAAVQMGVGTPGLVLIGLGVGLLCGAFNGVLVTRMGLPSIVVTIGTMSLFRGI 145
           A +  A+G    +G+  P  ++ G+  G +CG  NG+LVT+M +P  + T+G M   RGI
Sbjct: 86  AFSGVAVGICATLGLPLPVCIIAGVLAGGMCGYVNGLLVTKMTIPPFIATLGLMMSVRGI 145

Query: 146 SYIVLGDQA--FRGYPESFSWFGQGYVWWVISFELVLFAIIAVIYAMLLHKTNFGRAVYA 203
           + ++   +A  F  YP  F    QG ++ V+ + +    I+A++ A +L KT  GR VYA
Sbjct: 146 NMVMTDGRAIYFADYP-MFKTLAQGRLFDVLPYPVFYLVIVALVGAYILKKTVIGRYVYA 204

Query: 204 IGNNATGAMFSGIRVQRVKFILFLLTGLMSGVAAICLTARLGSTRPSIAMGWELEVVTMV 263
           +G+N   A  SGI+VQRVK  ++   GL++G+A + L +RL S +P++ +G+ELE +  V
Sbjct: 205 VGSNEVAAHLSGIKVQRVKIFVYAFCGLLTGIAGVILASRLNSGQPTVGVGYELEAIAAV 264

Query: 264 VLGGVSILGGSGTILGVVIAAFVMGLVTFGLGLLNVPGIVMSIVIGALLIGVIALPRL 321
           V+GG S++GG GTI G +I AF+M ++  GL L+ V      + +G +++  + L  L
Sbjct: 265 VIGGTSLMGGIGTIGGTIIGAFIMSVLKNGLNLMGVSQFWQMVAMGVVVVAAVYLDTL 322